Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 snoU13.1-201ENST00000459157 104 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.22□□□□□ -1.89
NKX2-1P43699 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.22□□□□□ -1.89
NKX2-1P43699 RPL23AP41-201ENST00000484754 458 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 RN7SL691P-201ENST00000494487 301 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 NIPA2P2-201ENST00000496376 1083 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.22□□□□□ -1.89
NKX2-1P43699 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.22□□□□□ -1.89
NKX2-1P43699 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX2-1P43699 MTCYBP20-201ENST00000524239 1129 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX2-1P43699 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.22□□□□□ -1.89
NKX2-1P43699 TVP23BP1-201ENST00000557500 617 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 EIF1P4-201ENST00000572664 335 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 OR4K8P-201ENST00000578842 1048 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.22□□□□□ -1.89
NKX2-1P43699 AC087683.1-201ENST00000591187 441 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 TPMTP1-201ENST00000592307 737 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX2-1P43699 AP001429.1-201ENST00000602568 530 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 AL359999.1-201ENST00000604513 294 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 AL034351.1-201ENST00000605288 668 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 NDUFA8P1-201ENST00000605525 367 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 AP000254.1-201ENST00000609934 520 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 AC013562.2-201ENST00000611632 603 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NKX2-1P43699 AL139089.1-201ENST00000620372 975 ntBASIC3.22□□□□□ -1.89
NKX2-1P43699 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NKX2-1P43699 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.22□□□□□ -1.89
NKX2-1P43699 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.22□□□□□ -1.89
NKX2-1P43699 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.22□□□□□ -1.89
NKX2-1P43699 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NKX2-1P43699 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NKX2-1P43699 MAPK10-372ENST00000641954 3413 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AC118273.1-201ENST00000525324 3006 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.21□□□□□ -1.9
NKX2-1P43699 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
NKX2-1P43699 RNU6-223P-201ENST00000362830 107 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.21□□□□□ -1.9
NKX2-1P43699 Y_RNA.548-201ENST00000384656 105 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 Y_RNA.559-201ENST00000384686 107 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 RPL7P25-201ENST00000404151 721 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 HMGN1P14-201ENST00000412459 517 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.21□□□□□ -1.9
NKX2-1P43699 RPL21P109-201ENST00000422213 475 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.21□□□□□ -1.9
NKX2-1P43699 RPL27AP8-201ENST00000424277 446 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AL356583.2-201ENST00000426536 280 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AL031667.1-201ENST00000440222 725 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-1P43699 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 RPS4XP4-201ENST00000443195 763 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.21□□□□□ -1.9
NKX2-1P43699 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-1P43699 AL359073.1-201ENST00000448036 403 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-1P43699 USP9YP12-201ENST00000450481 570 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 NANOGP10-201ENST00000453325 895 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 CFTRP1-201ENST00000456646 183 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 snoU109.1-201ENST00000459339 135 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 RPL38P1-201ENST00000460914 211 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-1P43699 VN1R104P-201ENST00000505115 1009 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AC109464.2-201ENST00000510242 943 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-1P43699 RNU6-405P-201ENST00000516637 110 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AP003467.2-201ENST00000520175 319 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NKX2-1P43699 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-1P43699 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.21□□□□□ -1.9
NKX2-1P43699 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.21□□□□□ -1.9
NKX2-1P43699 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-1P43699 MIR4715-201ENST00000584117 79 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.21□□□□□ -1.9
NKX2-1P43699 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.21□□□□□ -1.9
NKX2-1P43699 AC080078.2-201ENST00000603766 501 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AC112191.3-201ENST00000604371 277 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.21□□□□□ -1.9
NKX2-1P43699 AC103710.3-201ENST00000608157 948 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AC103710.4-201ENST00000609301 899 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AC012531.5-201ENST00000611375 151 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.21□□□□□ -1.9
NKX2-1P43699 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.21□□□□□ -1.9
NKX2-1P43699 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.21□□□□□ -1.9
NKX2-1P43699 TNPO1P3-201ENST00000436471 2662 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NKX2-1P43699 AL021368.2-201ENST00000606125 5352 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 AC024560.2-201ENST00000507981 1497 ntBASIC3.21□□□□□ -1.9
NKX2-1P43699 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NKX2-1P43699 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-1P43699 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NKX2-1P43699 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NKX2-1P43699 DEFB108F-201ENST00000344638 222 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 SNORD6-201ENST00000365444 73 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 OR5H15-201ENST00000383696 930 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 RNU6-637P-201ENST00000384050 107 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 RNU6-348P-201ENST00000384386 107 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 RNU6-114P-201ENST00000384704 105 ntBASIC3.2□□□□□ -1.9
NKX2-1P43699 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NKX2-1P43699 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms