Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM23P36406 RPS4XP22-201ENST00000480755 780 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM23P36406 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.25□□□□□ -1.89
TRIM23P36406 MLLT10P2-201ENST00000506434 249 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM23P36406 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM23P36406 AC026412.2-201ENST00000512270 1075 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM23P36406 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM23P36406 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM23P36406 NBEAP1-201ENST00000554452 979 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM23P36406 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.25□□□□□ -1.89
TRIM23P36406 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM23P36406 AP001029.3-201ENST00000588063 596 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 MTND3P19-201ENST00000603825 345 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM23P36406 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM23P36406 AL360181.4-201ENST00000621752 134 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 AC091925.2-201ENST00000625059 256 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM23P36406 AC002546.1-201ENST00000588041 2504 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM23P36406 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM23P36406 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM23P36406 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.25□□□□□ -1.89
TRIM23P36406 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TRIM23P36406 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM23P36406 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM23P36406 RNU1-70P-201ENST00000362618 164 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 Y_RNA.311-201ENST00000365068 96 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 SNORD51-201ENST00000384320 80 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AL592310.1-201ENST00000414330 671 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC063979.1-201ENST00000415539 377 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 SDCBPP3-201ENST00000419629 891 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM23P36406 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM23P36406 RPL23AP82-202ENST00000427528 469 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM23P36406 MTND4LP10-201ENST00000435146 291 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 CR769776.1-201ENST00000441254 787 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.24□□□□□ -1.89
TRIM23P36406 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM23P36406 RPL21P134-201ENST00000453468 483 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 CENPBD1P1-201ENST00000464061 469 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM23P36406 HMGB1P25-201ENST00000468402 607 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM23P36406 AC068724.1-201ENST00000487100 792 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 OR4G11P-201ENST00000492842 939 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 RN7SL504P-201ENST00000494496 287 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 RNU6-583P-201ENST00000516012 92 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 RNU1-61P-201ENST00000516107 151 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 SNORA74D-201ENST00000516404 141 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC104986.1-201ENST00000517978 436 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.24□□□□□ -1.89
TRIM23P36406 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM23P36406 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM23P36406 AC018630.1-201ENST00000541376 925 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC023050.2-201ENST00000544968 387 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC011602.1-201ENST00000546484 331 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM23P36406 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.24□□□□□ -1.89
TRIM23P36406 MTND4P33-201ENST00000556706 766 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM23P36406 AC009712.1-201ENST00000564938 316 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM23P36406 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM23P36406 ZNF415P1-201ENST00000582279 1166 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM23P36406 AC012493.2-201ENST00000595083 291 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 DUXAP3-201ENST00000603616 594 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.24□□□□□ -1.89
TRIM23P36406 AL162713.1-201ENST00000604480 262 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC009974.1-201ENST00000608881 455 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 VIS1.1-201ENST00000610517 203 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC097478.2-201ENST00000610572 514 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 uc_338.1-201ENST00000612113 180 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AL390240.1-201ENST00000612950 384 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC243773.3-201ENST00000613270 256 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AL157817.1-201ENST00000614264 790 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 AC006927.4-201ENST00000639187 543 ntBASIC3.24□□□□□ -1.89
TRIM23P36406 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM23P36406 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM23P36406 AC097714.1-201ENST00000511272 1647 ntBASIC3.23□□□□□ -1.89
TRIM23P36406 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
TRIM23P36406 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM23P36406 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM23P36406 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM23P36406 MIR30E-201ENST00000362104 92 ntBASIC3.23□□□□□ -1.89
TRIM23P36406 Y_RNA.192-201ENST00000363977 102 ntBASIC3.23□□□□□ -1.89
TRIM23P36406 AP002088.1-201ENST00000382740 395 ntBASIC3.23□□□□□ -1.89
TRIM23P36406 Y_RNA.408-201ENST00000383987 102 ntBASIC3.23□□□□□ -1.89
TRIM23P36406 MIR483-201ENST00000385070 76 ntBASIC3.23□□□□□ -1.89
TRIM23P36406 SNRPEP2-201ENST00000397592 279 ntBASIC3.23□□□□□ -1.89
TRIM23P36406 RNU4-65P-201ENST00000410473 140 ntBASIC3.23□□□□□ -1.89
TRIM23P36406 RNU6-55P-201ENST00000411092 107 ntBASIC3.23□□□□□ -1.89
TRIM23P36406 RNU6-954P-201ENST00000411355 107 ntBASIC3.23□□□□□ -1.89
TRIM23P36406 AC092447.6-201ENST00000414578 210 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms