Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC12P31275 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HOXC12P31275 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC12P31275 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXC12P31275 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC12P31275 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HOXC12P31275 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC12P31275 AC027290.2-201ENST00000623210 18662 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC12P31275 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC12P31275 Y_RNA.167-201ENST00000363735 109 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 RNU6-82P-201ENST00000363970 107 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 Y_RNA.315-201ENST00000365117 102 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC12P31275 Y_RNA.579-201ENST00000390939 94 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 PPIAP9-201ENST00000403866 498 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 DUTP5-201ENST00000406790 469 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 RNU2-43P-201ENST00000410306 190 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 POLHP1-201ENST00000411806 470 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AC016397.1-201ENST00000412463 242 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC12P31275 MTCO2P27-201ENST00000420740 428 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC12P31275 NDUFA5P4-201ENST00000436704 385 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC12P31275 BRK1P2-201ENST00000442875 223 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC12P31275 AC009963.2-201ENST00000453431 138 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC12P31275 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC12P31275 AC012158.1-204ENST00000483430 465 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC12P31275 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC12P31275 AC098591.2-201ENST00000510152 315 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 RNU6-123P-201ENST00000516163 102 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 RNU6-1088P-201ENST00000516850 104 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC12P31275 AC022360.1-201ENST00000521058 340 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC12P31275 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.68□□□□□ -1.66
HOXC12P31275 RPL10P14-201ENST00000565265 298 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AC093249.1-201ENST00000567049 203 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 RPL23AP84-201ENST00000571193 464 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 MIR4330-201ENST00000579077 105 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 MIR3934-201ENST00000579806 107 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 MIR7853-201ENST00000584820 132 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC12P31275 AP000769.2-201ENST00000602344 396 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AP001330.4-201ENST00000604350 154 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AC010680.4-201ENST00000605334 543 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AC090971.5-201ENST00000621102 293 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AC007998.5-201ENST00000622938 237 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 AC091953.3-201ENST00000623220 236 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 A2MP1-204ENST00000566278 4130 ntBASIC4.68□□□□□ -1.66
HOXC12P31275 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HOXC12P31275 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HOXC12P31275 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC12P31275 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC12P31275 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC12P31275 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC12P31275 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC12P31275 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC12P31275 AL133412.1-201ENST00000380194 2992 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HOXC12P31275 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC12P31275 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC12P31275 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HOXC12P31275 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC12P31275 SNORD113-7-201ENST00000363762 77 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AC110754.1-201ENST00000399740 601 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 RNA5SP111-201ENST00000411386 101 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AL591848.1-201ENST00000413092 322 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC12P31275 BTF3L4P3-201ENST00000418879 476 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC12P31275 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC12P31275 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC12P31275 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC12P31275 AC099670.2-201ENST00000435130 321 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC12P31275 AC090774.1-201ENST00000435925 246 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC12P31275 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC12P31275 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC12P31275 NDUFS5P3-201ENST00000450668 321 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.67□□□□□ -1.66
HOXC12P31275 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC12P31275 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC12P31275 AC083982.1-201ENST00000485679 344 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC12P31275 AC091912.1-201ENST00000511351 248 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC12P31275 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC12P31275 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC12P31275 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC12P31275 OR11H5P-201ENST00000554039 926 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AL121576.1-201ENST00000556055 276 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 AC106782.4-201ENST00000568264 210 ntBASIC4.67□□□□□ -1.66
HOXC12P31275 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms