Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RPL35AP22-201ENST00000436855 335 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.86□□□□□ -1.63
CNGA1P29973 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.86□□□□□ -1.63
CNGA1P29973 AC108059.3-201ENST00000456388 214 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.86□□□□□ -1.63
CNGA1P29973 RNU7-59P-201ENST00000459101 61 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 MTCO2P29-201ENST00000465212 189 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 RPS3AP17-201ENST00000472594 777 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 AC078817.1-201ENST00000492623 435 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNGA1P29973 HMGB1P22-201ENST00000505315 124 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.86□□□□□ -1.63
CNGA1P29973 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.86□□□□□ -1.63
CNGA1P29973 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNGA1P29973 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.86□□□□□ -1.63
CNGA1P29973 AP000857.1-201ENST00000532151 543 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.86□□□□□ -1.63
CNGA1P29973 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.86□□□□□ -1.63
CNGA1P29973 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.86□□□□□ -1.63
CNGA1P29973 RN7SL703P-201ENST00000578485 302 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 AC010928.3-201ENST00000587712 541 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 VN1R79P-201ENST00000593540 513 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 AL022154.1-201ENST00000604698 785 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 AC010201.1-201ENST00000605051 540 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 AC245517.5-201ENST00000611529 162 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 AC244100.1-202ENST00000621554 382 ntBASIC4.86□□□□□ -1.63
CNGA1P29973 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.86□□□□□ -1.63
CNGA1P29973 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CNGA1P29973 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNGA1P29973 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNGA1P29973 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNGA1P29973 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
CNGA1P29973 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.86□□□□□ -1.63
CNGA1P29973 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.85□□□□□ -1.63
CNGA1P29973 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
CNGA1P29973 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.85□□□□□ -1.63
CNGA1P29973 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CNGA1P29973 AC018529.3-201ENST00000624212 2254 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.85□□□□□ -1.63
CNGA1P29973 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNGA1P29973 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNGA1P29973 RNA5SP307-201ENST00000362863 116 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 Y_RNA.333-201ENST00000365274 102 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 SNORD3H-201ENST00000384486 214 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 HSPD1P16-201ENST00000402302 394 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 MTCO3P12-201ENST00000416718 547 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 SSXP9-201ENST00000417503 292 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 TOMM22P1-201ENST00000418578 312 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.85□□□□□ -1.63
CNGA1P29973 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.85□□□□□ -1.63
CNGA1P29973 C8orf59P1-201ENST00000429930 303 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.85□□□□□ -1.63
CNGA1P29973 RPS3AP50-201ENST00000487064 803 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.85□□□□□ -1.63
CNGA1P29973 AC108078.1-201ENST00000508073 725 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.85□□□□□ -1.63
CNGA1P29973 AC099522.1-202ENST00000514718 367 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 Vault.3-201ENST00000516676 95 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 SNORA31.20-201ENST00000517111 133 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 MTND1P5-201ENST00000517906 940 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 MTCYBP41-201ENST00000528913 1123 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.85□□□□□ -1.63
CNGA1P29973 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.85□□□□□ -1.63
CNGA1P29973 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.85□□□□□ -1.63
CNGA1P29973 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.85□□□□□ -1.63
CNGA1P29973 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.85□□□□□ -1.63
CNGA1P29973 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CNGA1P29973 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.85□□□□□ -1.63
CNGA1P29973 AL606490.9-201ENST00000603331 271 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 FAM27D1-201ENST00000612308 341 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CNGA1P29973 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CNGA1P29973 CR392039.5-201ENST00000623201 510 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 AC068880.5-201ENST00000624331 290 ntBASIC4.85□□□□□ -1.63
CNGA1P29973 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.85□□□□□ -1.63
CNGA1P29973 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.85□□□□□ -1.63
CNGA1P29973 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CNGA1P29973 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.85□□□□□ -1.63
CNGA1P29973 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.85□□□□□ -1.63
CNGA1P29973 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CNGA1P29973 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CNGA1P29973 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNGA1P29973 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNGA1P29973 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNGA1P29973 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CNGA1P29973 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CNGA1P29973 AC027514.1-201ENST00000588561 1603 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 OR5J1P-201ENST00000313544 939 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 MIR208A-201ENST00000362287 71 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 RNU1-20P-201ENST00000363314 162 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 RNA5SP235-201ENST00000365411 114 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.84□□□□□ -1.63
CNGA1P29973 RNU6-517P-201ENST00000384362 110 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 RPL7P60-201ENST00000397636 735 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 RNU2-43P-201ENST00000410306 190 ntBASIC4.84□□□□□ -1.63
CNGA1P29973 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms