Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL021407.1-201ENST00000404531 386 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
COL4A5P29400 Z82209.1-201ENST00000422141 2135 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 ELOCP6-201ENST00000429066 328 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 AL031663.1-201ENST00000437445 219 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A5P29400 ELOCP12-201ENST00000458706 328 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 SNORD108-201ENST00000459332 71 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 HMGN1P8-201ENST00000463578 288 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 AC005912.1-201ENST00000495392 255 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A5P29400 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.31□□□□□ -2.04
COL4A5P29400 AC068790.3-201ENST00000602988 553 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 MIR8081-201ENST00000611533 95 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.31□□□□□ -2.04
COL4A5P29400 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
COL4A5P29400 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.31□□□□□ -2.04
COL4A5P29400 RNU6-386P-201ENST00000362650 107 ntBASIC2.3□□□□□ -2.04
COL4A5P29400 DYNLT3P1-201ENST00000378574 347 ntBASIC2.3□□□□□ -2.04
COL4A5P29400 RNY1P14-201ENST00000384426 108 ntBASIC2.3□□□□□ -2.04
COL4A5P29400 HMGB1P31-201ENST00000437242 427 ntBASIC2.3□□□□□ -2.04
COL4A5P29400 AP000705.1-201ENST00000454567 350 ntBASIC2.3□□□□□ -2.04
COL4A5P29400 RPL21P103-201ENST00000479921 488 ntBASIC2.3□□□□□ -2.04
COL4A5P29400 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.3□□□□□ -2.04
COL4A5P29400 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
COL4A5P29400 RNU6-250P-201ENST00000516958 103 ntBASIC2.3□□□□□ -2.04
COL4A5P29400 HIGD1AP10-201ENST00000527837 282 ntBASIC2.3□□□□□ -2.04
COL4A5P29400 MIR4255-201ENST00000579351 72 ntBASIC2.3□□□□□ -2.04
COL4A5P29400 MIR548Y-201ENST00000582739 110 ntBASIC2.3□□□□□ -2.04
COL4A5P29400 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.3□□□□□ -2.04
COL4A5P29400 MTCO2P22-201ENST00000603246 681 ntBASIC2.3□□□□□ -2.04
COL4A5P29400 AC116563.2-201ENST00000624751 535 ntBASIC2.3□□□□□ -2.04
COL4A5P29400 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.3□□□□□ -2.04
COL4A5P29400 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL4A5P29400 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL4A5P29400 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL4A5P29400 RNA5SP325-201ENST00000363756 130 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 RNA5SP167-201ENST00000365461 116 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 AC019129.1-201ENST00000403786 261 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 RNU2-20P-201ENST00000410425 191 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.29□□□□□ -2.04
COL4A5P29400 ELOCP11-201ENST00000436690 332 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 ELOCP16-201ENST00000444494 332 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.29□□□□□ -2.04
COL4A5P29400 TRMT112P2-201ENST00000512910 132 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 AC117525.1-201ENST00000515228 503 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 AP005136.1-201ENST00000579765 429 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 AC060766.3-201ENST00000591442 263 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 AP000787.2-201ENST00000604432 568 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.29□□□□□ -2.04
COL4A5P29400 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL4A5P29400 AL139811.1-201ENST00000424779 2299 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL4A5P29400 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL4A5P29400 AC092326.2-201ENST00000624772 1561 ntBASIC2.29□□□□□ -2.04
COL4A5P29400 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.28□□□□□ -2.04
COL4A5P29400 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.28□□□□□ -2.04
COL4A5P29400 USP9YP7-201ENST00000436723 430 ntBASIC2.28□□□□□ -2.04
COL4A5P29400 RPL23AP76-201ENST00000441860 458 ntBASIC2.28□□□□□ -2.04
COL4A5P29400 USP9YP32-201ENST00000452432 430 ntBASIC2.28□□□□□ -2.04
COL4A5P29400 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.28□□□□□ -2.04
COL4A5P29400 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.28□□□□□ -2.04
COL4A5P29400 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.28□□□□□ -2.04
COL4A5P29400 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
COL4A5P29400 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.28□□□□□ -2.04
COL4A5P29400 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.28□□□□□ -2.04
COL4A5P29400 GZMAP1-201ENST00000503054 631 ntBASIC2.28□□□□□ -2.04
COL4A5P29400 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.28□□□□□ -2.04
COL4A5P29400 NDUFB4P9-201ENST00000511646 388 ntBASIC2.28□□□□□ -2.04
COL4A5P29400 MIR449C-201ENST00000516047 92 ntBASIC2.28□□□□□ -2.04
COL4A5P29400 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.28□□□□□ -2.04
COL4A5P29400 SNORA4-201ENST00000584302 138 ntBASIC2.28□□□□□ -2.04
COL4A5P29400 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.28□□□□□ -2.04
COL4A5P29400 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
COL4A5P29400 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.28□□□□□ -2.04
COL4A5P29400 AC015726.3-201ENST00000624501 418 ntBASIC2.28□□□□□ -2.04
COL4A5P29400 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.28□□□□□ -2.04
COL4A5P29400 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.28□□□□□ -2.04
COL4A5P29400 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
COL4A5P29400 ZNF33CP-201ENST00000432492 2030 ntBASIC2.28□□□□□ -2.04
COL4A5P29400 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL4A5P29400 AC123912.3-201ENST00000600907 1367 ntBASIC2.28□□□□□ -2.04
COL4A5P29400 RNU6-328P-201ENST00000390887 106 ntBASIC2.28□□□□□ -2.05
COL4A5P29400 MTND4P11-201ENST00000417020 1058 ntBASIC2.28□□□□□ -2.05
COL4A5P29400 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.28□□□□□ -2.05
COL4A5P29400 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.28□□□□□ -2.05
COL4A5P29400 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.28□□□□□ -2.05
COL4A5P29400 C1DP3-201ENST00000455013 423 ntBASIC2.28□□□□□ -2.05
COL4A5P29400 RPL23AP62-201ENST00000463396 453 ntBASIC2.28□□□□□ -2.05
COL4A5P29400 AL049830.2-201ENST00000480072 201 ntBASIC2.28□□□□□ -2.05
COL4A5P29400 AL163540.1-201ENST00000485382 386 ntBASIC2.28□□□□□ -2.05
COL4A5P29400 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.28□□□□□ -2.05
COL4A5P29400 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.28□□□□□ -2.05
COL4A5P29400 AC117490.2-201ENST00000610042 594 ntBASIC2.28□□□□□ -2.05
COL4A5P29400 AC055764.2-201ENST00000610089 670 ntBASIC2.28□□□□□ -2.05
COL4A5P29400 AC010678.1-201ENST00000614118 713 ntBASIC2.28□□□□□ -2.05
COL4A5P29400 AC121761.2-201ENST00000617300 689 ntBASIC2.28□□□□□ -2.05
COL4A5P29400 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.28□□□□□ -2.05
COL4A5P29400 FAM35CP-201ENST00000554755 2470 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms