Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AC090502.2-201ENST00000549267 280 ntBASIC3.98□□□□□ -1.77
LMO1P25800 AC133555.2-201ENST00000550213 292 ntBASIC3.98□□□□□ -1.77
LMO1P25800 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO1P25800 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO1P25800 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.98□□□□□ -1.77
LMO1P25800 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO1P25800 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO1P25800 MIR4330-201ENST00000579077 105 ntBASIC3.98□□□□□ -1.77
LMO1P25800 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.98□□□□□ -1.77
LMO1P25800 AC110743.1-201ENST00000584870 478 ntBASIC3.98□□□□□ -1.77
LMO1P25800 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LMO1P25800 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.98□□□□□ -1.77
LMO1P25800 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO1P25800 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.98□□□□□ -1.77
LMO1P25800 FAM27B-201ENST00000610601 213 ntBASIC3.98□□□□□ -1.77
LMO1P25800 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO1P25800 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.98□□□□□ -1.77
LMO1P25800 SNX18P1Y-201ENST00000616231 511 ntBASIC3.98□□□□□ -1.77
LMO1P25800 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.98□□□□□ -1.77
LMO1P25800 AC067931.1-201ENST00000624190 671 ntBASIC3.98□□□□□ -1.77
LMO1P25800 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
LMO1P25800 API5P2-201ENST00000397055 1498 ntBASIC3.98□□□□□ -1.77
LMO1P25800 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO1P25800 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LMO1P25800 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO1P25800 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
LMO1P25800 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
LMO1P25800 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LMO1P25800 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LMO1P25800 SNRPEP3-201ENST00000338402 276 ntBASIC3.97□□□□□ -1.77
LMO1P25800 Y_RNA.135-201ENST00000363439 95 ntBASIC3.97□□□□□ -1.77
LMO1P25800 Y_RNA.187-201ENST00000363918 113 ntBASIC3.97□□□□□ -1.77
LMO1P25800 Y_RNA.301-201ENST00000364990 103 ntBASIC3.97□□□□□ -1.77
LMO1P25800 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LMO1P25800 Y_RNA.447-201ENST00000384184 113 ntBASIC3.97□□□□□ -1.77
LMO1P25800 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LMO1P25800 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LMO1P25800 MIR921-201ENST00000401133 56 ntBASIC3.97□□□□□ -1.77
LMO1P25800 RPL7P25-201ENST00000404151 721 ntBASIC3.97□□□□□ -1.77
LMO1P25800 RNU2-28P-201ENST00000410457 189 ntBASIC3.97□□□□□ -1.77
LMO1P25800 RNU6-373P-201ENST00000411247 98 ntBASIC3.97□□□□□ -1.77
LMO1P25800 RPL31P12-201ENST00000422587 358 ntBASIC3.97□□□□□ -1.77
LMO1P25800 AL953862.1-201ENST00000423016 168 ntBASIC3.97□□□□□ -1.77
LMO1P25800 AC073335.1-201ENST00000427776 363 ntBASIC3.97□□□□□ -1.77
LMO1P25800 AC109583.1-201ENST00000432156 268 ntBASIC3.97□□□□□ -1.77
LMO1P25800 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO1P25800 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO1P25800 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO1P25800 AC239809.1-201ENST00000450470 217 ntBASIC3.97□□□□□ -1.77
LMO1P25800 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO1P25800 APOOP2-201ENST00000461561 539 ntBASIC3.97□□□□□ -1.77
LMO1P25800 AC010469.1-201ENST00000463864 576 ntBASIC3.97□□□□□ -1.77
LMO1P25800 RN7SL738P-201ENST00000470264 297 ntBASIC3.97□□□□□ -1.77
LMO1P25800 RPL30P11-201ENST00000495304 339 ntBASIC3.97□□□□□ -1.77
LMO1P25800 RPS4XP18-201ENST00000495480 763 ntBASIC3.97□□□□□ -1.77
LMO1P25800 SCARNA22-201ENST00000503991 125 ntBASIC3.97□□□□□ -1.77
LMO1P25800 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.97□□□□□ -1.77
LMO1P25800 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.97□□□□□ -1.77
LMO1P25800 RNU6-988P-201ENST00000519081 107 ntBASIC3.97□□□□□ -1.77
LMO1P25800 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.97□□□□□ -1.77
LMO1P25800 AP003181.2-201ENST00000528941 181 ntBASIC3.97□□□□□ -1.77
LMO1P25800 OR5B10P-201ENST00000532869 642 ntBASIC3.97□□□□□ -1.77
LMO1P25800 SUB1P2-201ENST00000556401 297 ntBASIC3.97□□□□□ -1.77
LMO1P25800 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.97□□□□□ -1.77
LMO1P25800 AC053481.3-201ENST00000577881 843 ntBASIC3.97□□□□□ -1.77
LMO1P25800 RPL26P30-202ENST00000602923 645 ntBASIC3.97□□□□□ -1.77
LMO1P25800 APOOP1-201ENST00000604695 592 ntBASIC3.97□□□□□ -1.77
LMO1P25800 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO1P25800 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.97□□□□□ -1.77
LMO1P25800 AP001005.3-201ENST00000622049 129 ntBASIC3.97□□□□□ -1.77
LMO1P25800 AC091953.5-201ENST00000622919 233 ntBASIC3.97□□□□□ -1.77
LMO1P25800 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO1P25800 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO1P25800 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
LMO1P25800 KPNA2P2-201ENST00000419546 1489 ntBASIC3.97□□□□□ -1.77
LMO1P25800 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LMO1P25800 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO1P25800 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO1P25800 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO1P25800 AL031119.1-201ENST00000404707 1879 ntBASIC3.96□□□□□ -1.77
LMO1P25800 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LMO1P25800 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.96□□□□□ -1.78
LMO1P25800 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.96□□□□□ -1.78
LMO1P25800 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LMO1P25800 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
LMO1P25800 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms