| TFE3 | P19532 | RNU4-14P-201 | ENST00000410858 | 122 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNU6-370P-201 | ENST00000411008 | 104 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | TBCAP2-201 | ENST00000416175 | 326 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | Z82205.1-201 | ENST00000428456 | 297 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL451139.1-201 | ENST00000434718 | 346 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | LINC01208-202 | ENST00000434969 | 827 nt | TSL 2 BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AF228730.2-201 | ENST00000438784 | 848 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | TBX18-AS1-202 | ENST00000441863 | 382 nt | TSL 2 BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | MRPL48P1-201 | ENST00000445390 | 636 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC000111.2-201 | ENST00000448200 | 210 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | LINC01753-201 | ENST00000458145 | 631 nt | TSL 3 BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RPL23AP56-201 | ENST00000460778 | 453 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | GYPB-202 | ENST00000502664 | 521 nt | TSL 1 (best) BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC140172.1-201 | ENST00000502928 | 141 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | NDUFB5P1-201 | ENST00000508134 | 564 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | HIGD1AP13-201 | ENST00000509878 | 289 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | Y_RNA.711-201 | ENST00000516993 | 102 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RNA5SP454-201 | ENST00000517231 | 127 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | HMGB1P19-201 | ENST00000517578 | 577 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC105031.1-201 | ENST00000518550 | 476 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AP000442.2-202 | ENST00000531311 | 601 nt | TSL 3 BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC140847.1-201 | ENST00000538025 | 534 nt | TSL 4 BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC007151.1-201 | ENST00000572774 | 483 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC008521.1-201 | ENST00000587471 | 187 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AF038458.1-201 | ENST00000588406 | 262 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC092364.1-202 | ENST00000593824 | 565 nt | TSL 4 BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL138889.2-201 | ENST00000603883 | 242 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC104662.1-201 | ENST00000604448 | 511 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC124303.1-201 | ENST00000605703 | 360 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC040896.1-201 | ENST00000613819 | 479 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC092683.2-203 | ENST00000618807 | 788 nt | TSL 5 BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC068870.2-201 | ENST00000620635 | 389 nt | BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | ASAH2-204 | ENST00000447815 | 2311 nt | TSL 1 (best) BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | C3orf58-202 | ENST00000441925 | 3260 nt | TSL 2 BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | MARCH1-202 | ENST00000339875 | 2476 nt | TSL 1 (best) BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | LINC02431-201 | ENST00000503929 | 3601 nt | TSL 1 (best) BASIC | 5.15 | □□□□□ -1.59 | | |
| TFE3 | P19532 | WDR5B-201 | ENST00000330689 | 3720 nt | APPRIS P1 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | THEMIS-204 | ENST00000537166 | 3830 nt | APPRIS ALT2 TSL 2 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | CASC1-204 | ENST00000395990 | 2417 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | CDK15-204 | ENST00000450471 | 3659 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | LRRC39-201 | ENST00000342895 | 1881 nt | APPRIS P1 TSL 5 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | ZNF468-203 | ENST00000595646 | 4407 nt | APPRIS P1 TSL 1 (best) BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | OR2D2-201 | ENST00000299459 | 1110 nt | APPRIS P1 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | SNORA73.1-201 | ENST00000363107 | 205 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | SNORA33.2-201 | ENST00000365413 | 134 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | CRP-202 | ENST00000368110 | 667 nt | TSL 3 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | SNORA51.8-201 | ENST00000384234 | 132 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | CTSL3P-202 | ENST00000412179 | 788 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC073333.1-201 | ENST00000418907 | 648 nt | TSL 3 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | OR2AM1P-201 | ENST00000422137 | 422 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC104333.2-201 | ENST00000422630 | 192 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | MRPS18BP2-201 | ENST00000434310 | 759 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL592494.1-201 | ENST00000437523 | 309 nt | TSL 5 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC004691.1-201 | ENST00000440376 | 547 nt | TSL 3 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RPL23AP33-201 | ENST00000442301 | 452 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | CYCSP24-201 | ENST00000445119 | 316 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL590399.6-201 | ENST00000446396 | 307 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | BTF3P6-201 | ENST00000448054 | 499 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RPL29P29-201 | ENST00000448725 | 423 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | GAS5-223 | ENST00000452197 | 483 nt | TSL 3 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC025918.1-201 | ENST00000452467 | 383 nt | TSL 3 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | ANKRD7-204 | ENST00000477532 | 744 nt | TSL 5 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL163540.1-201 | ENST00000485382 | 386 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | ATP1B3-AS1-201 | ENST00000492725 | 376 nt | TSL 5 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | MFAP3L-206 | ENST00000506110 | 548 nt | TSL 3 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC004054.1-201 | ENST00000515111 | 270 nt | TSL 3 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RN7SKP24-201 | ENST00000515888 | 284 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC011611.2-201 | ENST00000549888 | 358 nt | TSL 3 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | IMMP1LP2-201 | ENST00000552954 | 492 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL161713.1-201 | ENST00000555538 | 145 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL157688.1-201 | ENST00000555990 | 369 nt | TSL 3 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AL121576.1-201 | ENST00000556055 | 276 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC023824.4-201 | ENST00000562572 | 476 nt | TSL 3 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | ZNF230-204 | ENST00000585632 | 579 nt | TSL 2 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC211433.2-201 | ENST00000608433 | 387 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | RASSF8-215 | ENST00000611440 | 852 nt | TSL 5 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | EIF3FP1-201 | ENST00000613970 | 806 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC244093.3-201 | ENST00000615419 | 411 nt | TSL 3 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC087385.3-201 | ENST00000620477 | 187 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC007998.5-201 | ENST00000622938 | 237 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC243312.2-201 | ENST00000623340 | 601 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | OR52H1-202 | ENST00000641796 | 1061 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | MTRR-202 | ENST00000440940 | 3215 nt | APPRIS P1 TSL 1 (best) BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | ROS1-201 | ENST00000368507 | 7417 nt | APPRIS ALT2 TSL 5 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | GTDC1-202 | ENST00000344850 | 2607 nt | APPRIS P1 TSL 5 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | FYB1-201 | ENST00000351578 | 4750 nt | APPRIS P3 TSL 1 (best) BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | B3GNT5-201 | ENST00000326505 | 4123 nt | APPRIS P1 TSL 1 (best) BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | SP110-202 | ENST00000258382 | 2080 nt | TSL 1 (best) BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | FAM46D-202 | ENST00000538312 | 3106 nt | APPRIS P1 TSL 2 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | USP28-213 | ENST00000544967 | 3498 nt | TSL 1 (best) BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | AC009643.2-201 | ENST00000603543 | 1448 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | INTS6P1-201 | ENST00000504674 | 2530 nt | BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | CLVS1-205 | ENST00000519846 | 3622 nt | APPRIS P1 TSL 5 BASIC | 5.14 | □□□□□ -1.59 | | |
| TFE3 | P19532 | OR4S2-202 | ENST00000641692 | 2211 nt | APPRIS P1 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | ZNF429-209 | ENST00000618549 | 1889 nt | TSL 5 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | DOCK9-207 | ENST00000442173 | 7643 nt | APPRIS ALT2 TSL 5 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | OR8A1-203 | ENST00000641670 | 5709 nt | APPRIS P1 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | PCDH15-209 | ENST00000395433 | 6942 nt | TSL 5 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | CLUL1-213 | ENST00000620089 | 1947 nt | TSL 5 BASIC | 5.13 | □□□□□ -1.59 | | |
| TFE3 | P19532 | CLSPN-203 | ENST00000373220 | 3977 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.13 | □□□□□ -1.59 | | |