Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DOBP13765 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DOBP13765 AC027287.1-201ENST00000553115 1453 ntBASIC3.46□□□□□ -1.86
HLA-DOBP13765 MTND5P33-201ENST00000571250 1450 ntBASIC3.46□□□□□ -1.86
HLA-DOBP13765 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
HLA-DOBP13765 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DOBP13765 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DOBP13765 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DOBP13765 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DOBP13765 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DOBP13765 GNG5P1-201ENST00000255500 204 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 U8.3-201ENST00000363321 132 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 RNY4P34-201ENST00000364779 95 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 HSPD1P16-201ENST00000402302 394 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 RNU2-8P-201ENST00000410727 190 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC078974.1-201ENST00000411597 223 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC245052.5-201ENST00000416320 649 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC006548.1-201ENST00000427470 102 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 UBE2V1P13-201ENST00000436983 439 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 RPL21P89-201ENST00000444021 467 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 HSFY6P-201ENST00000445573 403 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 AL500522.2-201ENST00000448562 343 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 NUTF2P7-201ENST00000453086 375 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC104308.1-201ENST00000454621 333 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 RPL21P11-201ENST00000461458 483 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC126182.1-201ENST00000478134 357 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DOBP13765 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 NPM1P41-201ENST00000512920 831 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC010342.1-201ENST00000514047 877 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 Y_RNA.672-201ENST00000516289 104 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 RNU6-352P-201ENST00000516908 107 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC090281.1-201ENST00000523019 276 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 ZNF519P2-201ENST00000557032 169 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC090877.1-201ENST00000561418 344 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC136624.4-201ENST00000573044 370 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 VN1R79P-201ENST00000593540 513 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 DUXAP4-201ENST00000603046 613 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 LLPHP1-201ENST00000603571 367 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC091304.9-201ENST00000612091 226 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 U73479.1-201ENST00000618062 168 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC138649.3-201ENST00000622154 254 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 CR381572.1-201ENST00000625098 102 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DOBP13765 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DOBP13765 NMD3P1-201ENST00000439704 1488 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DOBP13765 AC009902.3-201ENST00000606235 2172 ntBASIC3.45□□□□□ -1.86
HLA-DOBP13765 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DOBP13765 AC011460.1-201ENST00000636268 1834 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DOBP13765 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DOBP13765 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
HLA-DOBP13765 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DOBP13765 Z73965.1-201ENST00000623412 2297 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DOBP13765 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DOBP13765 RN7SKP226-201ENST00000364912 300 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 MIR199A2-201ENST00000385289 110 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 RPL23AP48-201ENST00000406913 488 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 AL603766.1-201ENST00000407763 664 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DOBP13765 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DOBP13765 AC004975.1-201ENST00000428733 208 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 ATP5HP2-201ENST00000433885 485 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 CKS1BP5-201ENST00000434172 273 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 AC112653.1-201ENST00000443851 386 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DOBP13765 AC093392.2-201ENST00000450682 337 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DOBP13765 AC133473.1-201ENST00000455173 299 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DOBP13765 SNORD121B-201ENST00000458838 81 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 RPL7P15-201ENST00000461190 712 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DOBP13765 RPS3AP17-201ENST00000472594 777 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 ST13P14-201ENST00000474095 734 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 MTND1P3-201ENST00000484956 952 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DOBP13765 KCTD9P5-201ENST00000504141 1170 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DOBP13765 AC022483.1-201ENST00000514020 567 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 RNU6-506P-201ENST00000516553 94 ntBASIC3.44□□□□□ -1.86
HLA-DOBP13765 RNU2-46P-201ENST00000517038 113 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms