Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC026427.2-201ENST00000506228 536 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.7□□□□□ -1.66
COL6A2P12110 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 RNU4-49P-201ENST00000516080 140 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 RNU1-6P-201ENST00000516290 144 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.7□□□□□ -1.66
COL6A2P12110 AC103843.2-201ENST00000530523 682 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.7□□□□□ -1.66
COL6A2P12110 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.7□□□□□ -1.66
COL6A2P12110 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.7□□□□□ -1.66
COL6A2P12110 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.7□□□□□ -1.66
COL6A2P12110 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.7□□□□□ -1.66
COL6A2P12110 AC015912.2-201ENST00000571053 181 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 MIR5699-201ENST00000578903 90 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 AC067852.4-201ENST00000590314 478 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.7□□□□□ -1.66
COL6A2P12110 PART1_1.1-201ENST00000611761 217 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 RMST_7.1-201ENST00000621935 268 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 AC005086.4-201ENST00000623065 213 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.7□□□□□ -1.66
COL6A2P12110 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.7□□□□□ -1.66
COL6A2P12110 MIR1302-1-201ENST00000637932 143 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL6A2P12110 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL6A2P12110 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
COL6A2P12110 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.7□□□□□ -1.66
COL6A2P12110 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL6A2P12110 AC108751.5-201ENST00000492880 1336 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL6A2P12110 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
COL6A2P12110 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL6A2P12110 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.7□□□□□ -1.66
COL6A2P12110 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.69□□□□□ -1.66
COL6A2P12110 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.69□□□□□ -1.66
COL6A2P12110 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL6A2P12110 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.69□□□□□ -1.66
COL6A2P12110 AC092435.4-201ENST00000623012 4159 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL6A2P12110 RPL23P2-201ENST00000320371 421 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC067945.1-201ENST00000342609 618 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 RNU6-552P-201ENST00000362869 119 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 RNU5E-6P-201ENST00000365574 115 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 SNORD96B-201ENST00000386148 79 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 SNORD37.1-201ENST00000390968 65 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 RNU6-821P-201ENST00000390995 107 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AL136372.1-201ENST00000403060 228 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 RNU4-26P-201ENST00000410270 107 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 Y_RNA.615-201ENST00000410769 117 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 CHEK2P3-201ENST00000416118 248 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 Z74021.1-201ENST00000423610 407 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AL138785.1-201ENST00000425821 331 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.69□□□□□ -1.66
COL6A2P12110 ELOCP18-201ENST00000434209 337 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC093414.1-201ENST00000434712 514 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC005094.1-201ENST00000440420 368 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 MTND1P18-201ENST00000448191 573 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.69□□□□□ -1.66
COL6A2P12110 PPIAP3-201ENST00000450588 505 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.69□□□□□ -1.66
COL6A2P12110 AC079804.1-201ENST00000461922 436 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 RPL37P6-202ENST00000464216 403 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 RN7SL817P-201ENST00000480777 288 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC108022.1-201ENST00000493466 478 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC092436.1-201ENST00000506450 503 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC004980.4-201ENST00000513375 203 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.69□□□□□ -1.66
COL6A2P12110 HIGD1AP3-201ENST00000515857 278 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 RNU6-64P-201ENST00000517119 105 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.69□□□□□ -1.66
COL6A2P12110 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.69□□□□□ -1.66
COL6A2P12110 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.69□□□□□ -1.66
COL6A2P12110 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.69□□□□□ -1.66
COL6A2P12110 GSTP1P1-201ENST00000548078 319 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.69□□□□□ -1.66
COL6A2P12110 AC005668.1-201ENST00000571142 476 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC209154.1-201ENST00000582156 337 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC022726.1-201ENST00000587475 207 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC006116.3-201ENST00000592968 361 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC091979.2-201ENST00000607514 214 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.69□□□□□ -1.66
COL6A2P12110 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.69□□□□□ -1.66
COL6A2P12110 AC018445.2-201ENST00000622987 260 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 C2orf27A-204ENST00000623058 969 ntBASIC4.69□□□□□ -1.66
COL6A2P12110 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.69□□□□□ -1.66
COL6A2P12110 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.69□□□□□ -1.66
COL6A2P12110 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL6A2P12110 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
COL6A2P12110 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
COL6A2P12110 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL6A2P12110 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL6A2P12110 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL6A2P12110 NEAT1-202ENST00000501122 22743 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL6A2P12110 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.68□□□□□ -1.66
COL6A2P12110 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL6A2P12110 RNU6-960P-201ENST00000364056 120 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 SNORA62.1-201ENST00000364287 154 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 U3.12-201ENST00000364498 214 ntBASIC4.68□□□□□ -1.66
COL6A2P12110 RNU6-641P-201ENST00000384006 107 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms