Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AP000676.4-201ENST00000624659 623 ntBASIC3.28□□□□□ -1.88
TOP1P11387 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.28□□□□□ -1.88
TOP1P11387 AC009487.2-201ENST00000420969 6821 ntBASIC3.28□□□□□ -1.88
TOP1P11387 AC092593.1-201ENST00000515413 1815 ntBASIC3.28□□□□□ -1.88
TOP1P11387 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TOP1P11387 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TOP1P11387 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.27□□□□□ -1.89
TOP1P11387 RPL9P7-201ENST00000330965 580 ntBASIC3.27□□□□□ -1.89
TOP1P11387 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TOP1P11387 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TOP1P11387 Y_RNA.510-201ENST00000384511 114 ntBASIC3.27□□□□□ -1.89
TOP1P11387 MIR16-1-201ENST00000385271 89 ntBASIC3.27□□□□□ -1.89
TOP1P11387 AL592148.1-201ENST00000413568 445 ntBASIC3.27□□□□□ -1.89
TOP1P11387 AL445183.3-201ENST00000414168 502 ntBASIC3.27□□□□□ -1.89
TOP1P11387 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.27□□□□□ -1.89
TOP1P11387 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.27□□□□□ -1.89
TOP1P11387 YWHAZP7-201ENST00000436906 631 ntBASIC3.27□□□□□ -1.89
TOP1P11387 RPS29P6-201ENST00000438196 145 ntBASIC3.27□□□□□ -1.89
TOP1P11387 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.27□□□□□ -1.89
TOP1P11387 GXYLT1P1-201ENST00000446657 490 ntBASIC3.27□□□□□ -1.89
TOP1P11387 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.27□□□□□ -1.89
TOP1P11387 MTCO3P2-201ENST00000457365 171 ntBASIC3.27□□□□□ -1.89
TOP1P11387 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.27□□□□□ -1.89
TOP1P11387 NAMPTP2-201ENST00000505629 1115 ntBASIC3.27□□□□□ -1.89
TOP1P11387 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.27□□□□□ -1.89
TOP1P11387 RNA5SP356-201ENST00000515972 94 ntBASIC3.27□□□□□ -1.89
TOP1P11387 SNORA31.26-201ENST00000517250 137 ntBASIC3.27□□□□□ -1.89
TOP1P11387 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.27□□□□□ -1.89
TOP1P11387 COX6CP8-201ENST00000522620 226 ntBASIC3.27□□□□□ -1.89
TOP1P11387 ARL2BPP5-201ENST00000523141 481 ntBASIC3.27□□□□□ -1.89
TOP1P11387 EEF1B2P4-201ENST00000551398 348 ntBASIC3.27□□□□□ -1.89
TOP1P11387 AC093510.2-201ENST00000562820 896 ntBASIC3.27□□□□□ -1.89
TOP1P11387 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.27□□□□□ -1.89
TOP1P11387 DUXAP4-201ENST00000603046 613 ntBASIC3.27□□□□□ -1.89
TOP1P11387 AC096947.1-201ENST00000603233 470 ntBASIC3.27□□□□□ -1.89
TOP1P11387 AC022306.3-201ENST00000619930 550 ntBASIC3.27□□□□□ -1.89
TOP1P11387 Z99129.2-201ENST00000619967 314 ntBASIC3.27□□□□□ -1.89
TOP1P11387 AP000943.4-201ENST00000622912 357 ntBASIC3.27□□□□□ -1.89
TOP1P11387 LRRC77P-213ENST00000637727 880 ntBASIC3.27□□□□□ -1.89
TOP1P11387 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TOP1P11387 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TOP1P11387 NUP58P1-201ENST00000502546 1738 ntBASIC3.27□□□□□ -1.89
TOP1P11387 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TOP1P11387 AC233263.6-201ENST00000631132 1963 ntBASIC3.27□□□□□ -1.89
TOP1P11387 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TOP1P11387 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.26□□□□□ -1.89
TOP1P11387 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.26□□□□□ -1.89
TOP1P11387 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TOP1P11387 RNU5D-1-201ENST00000363299 116 ntBASIC3.26□□□□□ -1.89
TOP1P11387 SNORD82-201ENST00000365530 70 ntBASIC3.26□□□□□ -1.89
TOP1P11387 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.26□□□□□ -1.89
TOP1P11387 AL138827.1-201ENST00000402666 306 ntBASIC3.26□□□□□ -1.89
TOP1P11387 ATG3P1-201ENST00000419507 911 ntBASIC3.26□□□□□ -1.89
TOP1P11387 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.26□□□□□ -1.89
TOP1P11387 MTCO1P39-201ENST00000426148 480 ntBASIC3.26□□□□□ -1.89
TOP1P11387 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.26□□□□□ -1.89
TOP1P11387 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.26□□□□□ -1.89
TOP1P11387 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.26□□□□□ -1.89
TOP1P11387 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TOP1P11387 AC004924.1-201ENST00000480160 781 ntBASIC3.26□□□□□ -1.89
TOP1P11387 RPL21P47-201ENST00000483696 477 ntBASIC3.26□□□□□ -1.89
TOP1P11387 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.26□□□□□ -1.89
TOP1P11387 AC119751.5-201ENST00000514077 770 ntBASIC3.26□□□□□ -1.89
TOP1P11387 MTCO3P27-201ENST00000514397 196 ntBASIC3.26□□□□□ -1.89
TOP1P11387 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.26□□□□□ -1.89
TOP1P11387 HMGB1P1-201ENST00000522557 636 ntBASIC3.26□□□□□ -1.89
TOP1P11387 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.26□□□□□ -1.89
TOP1P11387 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.26□□□□□ -1.89
TOP1P11387 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.26□□□□□ -1.89
TOP1P11387 AC245036.5-201ENST00000596330 847 ntBASIC3.26□□□□□ -1.89
TOP1P11387 AC012669.1-201ENST00000603209 283 ntBASIC3.26□□□□□ -1.89
TOP1P11387 AC106900.2-201ENST00000604994 317 ntBASIC3.26□□□□□ -1.89
TOP1P11387 AC026741.1-201ENST00000605892 482 ntBASIC3.26□□□□□ -1.89
TOP1P11387 AP000240.1-201ENST00000609910 452 ntBASIC3.26□□□□□ -1.89
TOP1P11387 AC107871.2-201ENST00000612894 502 ntBASIC3.26□□□□□ -1.89
TOP1P11387 AL049777.1-201ENST00000622740 518 ntBASIC3.26□□□□□ -1.89
TOP1P11387 AC073348.1-201ENST00000623002 331 ntBASIC3.26□□□□□ -1.89
TOP1P11387 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TOP1P11387 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TOP1P11387 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.25□□□□□ -1.89
TOP1P11387 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.25□□□□□ -1.89
TOP1P11387 AL513185.3-201ENST00000433335 1300 ntBASIC3.25□□□□□ -1.89
TOP1P11387 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.25□□□□□ -1.89
TOP1P11387 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TOP1P11387 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.25□□□□□ -1.89
TOP1P11387 MIR16-2-201ENST00000362117 81 ntBASIC3.25□□□□□ -1.89
TOP1P11387 RNU6-619P-201ENST00000365146 108 ntBASIC3.25□□□□□ -1.89
TOP1P11387 RNU6-481P-201ENST00000384194 107 ntBASIC3.25□□□□□ -1.89
TOP1P11387 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TOP1P11387 RPL22P22-201ENST00000395439 379 ntBASIC3.25□□□□□ -1.89
TOP1P11387 BX664727.1-201ENST00000416024 466 ntBASIC3.25□□□□□ -1.89
TOP1P11387 AL139281.1-201ENST00000422120 335 ntBASIC3.25□□□□□ -1.89
TOP1P11387 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.25□□□□□ -1.89
TOP1P11387 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.25□□□□□ -1.89
TOP1P11387 AL513043.1-201ENST00000439124 535 ntBASIC3.25□□□□□ -1.89
TOP1P11387 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.25□□□□□ -1.89
TOP1P11387 RNA5SP76-201ENST00000516277 87 ntBASIC3.25□□□□□ -1.89
TOP1P11387 AP003355.1-201ENST00000518956 587 ntBASIC3.25□□□□□ -1.89
TOP1P11387 OR10V3P-201ENST00000525712 725 ntBASIC3.25□□□□□ -1.89
TOP1P11387 OR4P1P-201ENST00000530808 1136 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms