Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 AL133162.1-201ENST00000463228 453 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DOAP06340 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 HMGB1P29-201ENST00000505659 499 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 AC006390.1-201ENST00000508068 283 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 HMGN1P11-201ENST00000508668 303 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 RNU1-95P-201ENST00000516357 160 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 RNU1-128P-201ENST00000516704 160 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 AC233702.9-201ENST00000581528 203 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 AC008752.3-201ENST00000588113 712 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 AC006272.2-201ENST00000594725 163 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 AC078899.5-201ENST00000612475 178 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 AP003400.5-201ENST00000624827 617 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 PISRT1-201ENST00000626175 531 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DOAP06340 AC099654.5-201ENST00000636479 350 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DOAP06340 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DOAP06340 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DOAP06340 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DOAP06340 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DOAP06340 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 Y_RNA.1-201ENST00000352915 104 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 RNU6-181P-201ENST00000363225 107 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 SNORA51.6-201ENST00000384151 125 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 RPL21P17-201ENST00000397467 475 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 RN7SKP266-201ENST00000410232 287 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 RNU6-603P-201ENST00000411403 107 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 HMGB3P20-201ENST00000417997 600 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 OR4F13P-201ENST00000428478 931 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 RPL17P49-201ENST00000443728 411 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC099563.1-201ENST00000456086 418 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC022034.3-201ENST00000471393 478 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC087312.1-201ENST00000471411 480 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DOAP06340 FAM172BP-201ENST00000487497 1089 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC112204.1-201ENST00000502591 103 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 OR5H5P-201ENST00000503164 928 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 FTH1P24-201ENST00000503502 462 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC025554.1-201ENST00000505641 188 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC022447.3-201ENST00000506865 495 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC025465.4-201ENST00000513422 638 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC022695.1-201ENST00000522089 237 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 AL512360.1-201ENST00000555346 234 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DOAP06340 AL035413.2-201ENST00000604801 525 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 AL445264.1-201ENST00000621719 171 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HLA-DOAP06340 CCT4P2-201ENST00000233836 1548 ntBASIC4.56□□□□□ -1.68
HLA-DOAP06340 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DOAP06340 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DOAP06340 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DOAP06340 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DOAP06340 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 CBX3P1-201ENST00000325243 554 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 Y_RNA.160-201ENST00000363677 92 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 SNORA73.2-201ENST00000364946 201 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 SNORA5A-201ENST00000384111 134 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 MTCO1P17-201ENST00000411522 491 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 AL353193.1-201ENST00000421444 268 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC002486.1-201ENST00000435098 391 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 ARPC3P1-201ENST00000437218 533 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 SKP1P1-201ENST00000438081 489 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 SNRPEP7-201ENST00000438350 220 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC026410.2-201ENST00000460281 156 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 RPL31P50-201ENST00000471002 296 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 AL136126.1-201ENST00000473603 402 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 RPS29P25-201ENST00000481709 171 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms