Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC108161.1-201ENST00000461060 402 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 RN7SL583P-201ENST00000475692 287 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 RPL38P3-201ENST00000484463 213 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 AC072052.1-201ENST00000496556 306 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 RNU6-475P-201ENST00000516073 104 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 RNU6-513P-201ENST00000516104 104 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 AC009812.2-201ENST00000517657 457 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 CDH12P4-201ENST00000517835 295 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 CDH12P3-201ENST00000517935 295 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 CDH12P1-201ENST00000518435 295 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.27□□□□□ -1.57
PDGFAP04085 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.27□□□□□ -1.57
PDGFAP04085 MRPS21P7-201ENST00000566937 238 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 MYL12BP1-201ENST00000569826 507 ntBASIC5.27□□□□□ -1.57
PDGFAP04085 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.27□□□□□ -1.57
PDGFAP04085 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PDGFAP04085 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.27□□□□□ -1.57
PDGFAP04085 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFAP04085 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFAP04085 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PDGFAP04085 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFAP04085 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFAP04085 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
PDGFAP04085 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
PDGFAP04085 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PDGFAP04085 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.26□□□□□ -1.57
PDGFAP04085 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PDGFAP04085 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.26□□□□□ -1.57
PDGFAP04085 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFAP04085 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PDGFAP04085 AC138393.1-203ENST00000327086 343 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 RNA5SP183-201ENST00000362452 119 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 RNU6-371P-201ENST00000364283 108 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 RNU6-99P-201ENST00000364721 107 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 Y_RNA.645-201ENST00000391229 102 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 RNU6-101P-201ENST00000410323 104 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 RN7SKP58-201ENST00000411010 305 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 MYL6P5-201ENST00000412707 459 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 RPL21P90-201ENST00000415692 466 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.26□□□□□ -1.57
PDGFAP04085 AC015977.1-201ENST00000418887 292 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFAP04085 AL590762.4-201ENST00000425885 253 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFAP04085 AC138761.5-201ENST00000433967 325 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFAP04085 CECR9-201ENST00000453421 199 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 Z92846.1-201ENST00000456203 268 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.26□□□□□ -1.57
PDGFAP04085 AC091180.1-201ENST00000462104 372 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFAP04085 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFAP04085 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.26□□□□□ -1.57
PDGFAP04085 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.26□□□□□ -1.57
PDGFAP04085 AC096996.1-201ENST00000563813 325 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PDGFAP04085 Mico1.1-201ENST00000611698 204 ntBASIC5.26□□□□□ -1.57
PDGFAP04085 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.26□□□□□ -1.57
PDGFAP04085 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.26□□□□□ -1.57
PDGFAP04085 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFAP04085 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFAP04085 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFAP04085 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFAP04085 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFAP04085 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PDGFAP04085 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PDGFAP04085 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFAP04085 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
PDGFAP04085 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFAP04085 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.25□□□□□ -1.57
PDGFAP04085 GVINP1-202ENST00000531871 7271 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFAP04085 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFAP04085 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.25□□□□□ -1.57
PDGFAP04085 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.25□□□□□ -1.57
PDGFAP04085 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PDGFAP04085 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFAP04085 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
PDGFAP04085 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDGFAP04085 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFAP04085 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFAP04085 Y_RNA.39-201ENST00000362620 98 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 RNU6-1303P-201ENST00000364841 107 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 RNU6-1329P-201ENST00000365664 107 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 RNU6-1222P-201ENST00000384615 107 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 MIR517A-201ENST00000385001 87 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 RNU1-77P-201ENST00000390868 162 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 RN7SKP151-201ENST00000410230 316 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.25□□□□□ -1.57
PDGFAP04085 AC073063.1-201ENST00000434352 607 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFAP04085 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFAP04085 RN7SL222P-201ENST00000476452 299 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 AC068781.1-201ENST00000488231 618 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 AC008489.1-201ENST00000524271 483 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 AC107918.3-201ENST00000533272 382 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFAP04085 HMGN2P6-201ENST00000551091 273 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 BNIP3P5-201ENST00000562290 498 ntBASIC5.25□□□□□ -1.57
PDGFAP04085 RPL23AP87-202ENST00000573039 466 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms