Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
COL1A1P02452 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.45□□□□□ -2.02
COL1A1P02452 SNRPGP9-201ENST00000456025 225 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.45□□□□□ -2.02
COL1A1P02452 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.45□□□□□ -2.02
COL1A1P02452 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.45□□□□□ -2.02
COL1A1P02452 OR4T1P-201ENST00000554933 911 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.45□□□□□ -2.02
COL1A1P02452 AP003117.1-201ENST00000602771 554 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 AC016877.3-201ENST00000606778 504 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.45□□□□□ -2.02
COL1A1P02452 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.45□□□□□ -2.02
COL1A1P02452 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
COL1A1P02452 AC004520.1-201ENST00000608362 1413 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 MTND5P3-201ENST00000438536 1800 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL1A1P02452 SNORA17.3-201ENST00000391159 129 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 MTND4P11-201ENST00000417020 1058 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.44□□□□□ -2.02
COL1A1P02452 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.44□□□□□ -2.02
COL1A1P02452 ELOCP11-201ENST00000436690 332 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.44□□□□□ -2.02
COL1A1P02452 HMGB1P12-201ENST00000438594 598 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 ELOCP16-201ENST00000444494 332 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 TAF9P1-201ENST00000445421 515 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 TAF9P2-201ENST00000454958 515 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.44□□□□□ -2.02
COL1A1P02452 AP000852.1-201ENST00000472460 573 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 AC017007.3-201ENST00000479865 435 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 AC104435.1-201ENST00000483483 166 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.44□□□□□ -2.02
COL1A1P02452 AC090543.1-201ENST00000492168 485 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 AC008083.2-201ENST00000546707 476 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 SYF2P1-201ENST00000550658 413 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 AL163153.1-201ENST00000554223 283 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 CENPUP2-201ENST00000555897 1186 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 AC012213.4-201ENST00000606457 354 ntBASIC2.44□□□□□ -2.02
COL1A1P02452 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
COL1A1P02452 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.44□□□□□ -2.02
COL1A1P02452 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL1A1P02452 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.43□□□□□ -2.02
COL1A1P02452 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL1A1P02452 AL096701.2-201ENST00000416920 238 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 Z82205.1-201ENST00000428456 297 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 ELOCP13-201ENST00000443934 329 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 AC009961.3-201ENST00000449832 765 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 AL109741.2-201ENST00000455561 343 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.43□□□□□ -2.02
COL1A1P02452 TTC39CP1-201ENST00000512513 755 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 RNA5SP182-201ENST00000516064 82 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 RN7SKP234-201ENST00000517173 224 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.43□□□□□ -2.02
COL1A1P02452 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.43□□□□□ -2.02
COL1A1P02452 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.43□□□□□ -2.02
COL1A1P02452 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
COL1A1P02452 MIR3690-201ENST00000580266 75 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.43□□□□□ -2.02
COL1A1P02452 AC091488.1-201ENST00000604239 660 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 AL391813.2-201ENST00000609113 322 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 AC093673.2-201ENST00000609674 331 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 MTND4P34-201ENST00000572715 1371 ntBASIC2.43□□□□□ -2.02
COL1A1P02452 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL1A1P02452 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL1A1P02452 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.43□□□□□ -2.02
COL1A1P02452 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
COL1A1P02452 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.43□□□□□ -2.02
COL1A1P02452 Y_RNA.122-201ENST00000363331 96 ntBASIC2.42□□□□□ -2.02
COL1A1P02452 MIR607-201ENST00000385241 96 ntBASIC2.42□□□□□ -2.02
COL1A1P02452 NPM1P10-201ENST00000398310 865 ntBASIC2.42□□□□□ -2.02
COL1A1P02452 RPL23AP47-201ENST00000408017 460 ntBASIC2.42□□□□□ -2.02
COL1A1P02452 AC004022.2-201ENST00000413824 193 ntBASIC2.42□□□□□ -2.02
COL1A1P02452 SETP8-201ENST00000435341 628 ntBASIC2.42□□□□□ -2.02
COL1A1P02452 HMGB1P45-201ENST00000435986 653 ntBASIC2.42□□□□□ -2.02
COL1A1P02452 ARL5AP2-201ENST00000444698 533 ntBASIC2.42□□□□□ -2.02
COL1A1P02452 TPMTP4-201ENST00000450749 678 ntBASIC2.42□□□□□ -2.02
COL1A1P02452 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
COL1A1P02452 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.42□□□□□ -2.02
COL1A1P02452 MTND4LP22-201ENST00000508209 276 ntBASIC2.42□□□□□ -2.02
COL1A1P02452 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.42□□□□□ -2.02
COL1A1P02452 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.42□□□□□ -2.02
COL1A1P02452 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.42□□□□□ -2.02
COL1A1P02452 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.42□□□□□ -2.02
COL1A1P02452 MIR4474-201ENST00000579189 78 ntBASIC2.42□□□□□ -2.02
COL1A1P02452 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
COL1A1P02452 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL1A1P02452 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL1A1P02452 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
COL1A1P02452 AC019129.1-201ENST00000403786 261 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 CYCSP49-201ENST00000420810 319 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 OR4K11P-201ENST00000431829 904 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 MTCYBP29-201ENST00000436327 1006 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 HMGN2P20-201ENST00000437531 273 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.41□□□□□ -2.02
COL1A1P02452 RPS26P30-201ENST00000443431 335 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.41□□□□□ -2.02
COL1A1P02452 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.41□□□□□ -2.02
COL1A1P02452 AC089999.1-201ENST00000460336 374 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.41□□□□□ -2.02
COL1A1P02452 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms