Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC123904.2-201ENST00000548059 300 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.17□□□□□ -1.58
SRGAP3O43295 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.17□□□□□ -1.58
SRGAP3O43295 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.17□□□□□ -1.58
SRGAP3O43295 LARP7P2-201ENST00000575306 125 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.17□□□□□ -1.58
SRGAP3O43295 Z84480.1-201ENST00000605131 311 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 uc_338.5-201ENST00000611839 155 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 AC023043.4-201ENST00000612081 449 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 MIR7151-201ENST00000617477 60 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.17□□□□□ -1.58
SRGAP3O43295 MIR7154-201ENST00000620673 73 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 TPTEP1-208ENST00000636884 213 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 MIR492-201ENST00000638676 116 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
SRGAP3O43295 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SRGAP3O43295 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SRGAP3O43295 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SRGAP3O43295 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SRGAP3O43295 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SRGAP3O43295 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SRGAP3O43295 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SRGAP3O43295 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.16□□□□□ -1.58
SRGAP3O43295 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SRGAP3O43295 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SRGAP3O43295 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SRGAP3O43295 AC092162.3-201ENST00000624511 1624 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 AC116667.1-201ENST00000604855 2072 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
SRGAP3O43295 NACAP2-201ENST00000318548 624 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 RNU6-853P-201ENST00000364306 107 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 RNU6-730P-201ENST00000383954 104 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 SNORA32.2-201ENST00000384049 122 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 RNU6-729P-201ENST00000384399 107 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 RNU11-4P-201ENST00000391149 133 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 AL031679.1-201ENST00000400616 525 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 AL022722.2-201ENST00000402519 180 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 AL354719.1-201ENST00000406535 843 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SRGAP3O43295 RNA5SP317-201ENST00000410176 116 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 RNA5SP311-201ENST00000411290 116 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.16□□□□□ -1.58
SRGAP3O43295 AL353777.1-201ENST00000425552 326 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.16□□□□□ -1.58
SRGAP3O43295 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.16□□□□□ -1.58
SRGAP3O43295 AC016691.1-201ENST00000441321 413 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 AC006011.1-201ENST00000442758 349 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.16□□□□□ -1.58
SRGAP3O43295 AC103987.1-201ENST00000473394 348 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SRGAP3O43295 RN7SL604P-201ENST00000492589 296 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.16□□□□□ -1.58
SRGAP3O43295 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.16□□□□□ -1.58
SRGAP3O43295 RNA5SP315-201ENST00000516340 116 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 RNA5SP312-201ENST00000517068 116 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.16□□□□□ -1.58
SRGAP3O43295 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.16□□□□□ -1.58
SRGAP3O43295 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.16□□□□□ -1.58
SRGAP3O43295 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.16□□□□□ -1.58
SRGAP3O43295 AC005668.1-201ENST00000571142 476 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.16□□□□□ -1.58
SRGAP3O43295 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.16□□□□□ -1.58
SRGAP3O43295 AC115621.1-201ENST00000604653 858 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 AC121334.2-201ENST00000605387 271 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 HSPE1P14-201ENST00000605812 302 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 BX664608.1-201ENST00000610519 487 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 AC009161.2-201ENST00000624626 138 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SRGAP3O43295 AC022031.1-201ENST00000585985 2593 ntBASIC5.16□□□□□ -1.58
SRGAP3O43295 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SRGAP3O43295 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SRGAP3O43295 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SRGAP3O43295 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SRGAP3O43295 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SRGAP3O43295 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SRGAP3O43295 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SRGAP3O43295 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.15□□□□□ -1.58
SRGAP3O43295 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SRGAP3O43295 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SRGAP3O43295 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.15□□□□□ -1.58
SRGAP3O43295 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.15□□□□□ -1.58
SRGAP3O43295 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SRGAP3O43295 RNU6-1120P-201ENST00000362988 108 ntBASIC5.15□□□□□ -1.59
SRGAP3O43295 RNU6-744P-201ENST00000365557 107 ntBASIC5.15□□□□□ -1.59
SRGAP3O43295 RNU6-1316P-201ENST00000384242 108 ntBASIC5.15□□□□□ -1.59
SRGAP3O43295 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SRGAP3O43295 RN7SKP32-201ENST00000410167 303 ntBASIC5.15□□□□□ -1.59
SRGAP3O43295 RN7SKP247-201ENST00000411094 308 ntBASIC5.15□□□□□ -1.59
SRGAP3O43295 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.15□□□□□ -1.59
SRGAP3O43295 AC004975.1-201ENST00000428733 208 ntBASIC5.15□□□□□ -1.59
SRGAP3O43295 SAR1AP4-201ENST00000429225 591 ntBASIC5.15□□□□□ -1.59
SRGAP3O43295 AC119618.1-201ENST00000434191 222 ntBASIC5.15□□□□□ -1.59
SRGAP3O43295 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.15□□□□□ -1.59
SRGAP3O43295 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.15□□□□□ -1.59
SRGAP3O43295 NUTF2P7-201ENST00000453086 375 ntBASIC5.15□□□□□ -1.59
SRGAP3O43295 RPS26P28-201ENST00000470806 348 ntBASIC5.15□□□□□ -1.59
SRGAP3O43295 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SRGAP3O43295 AC010587.1-201ENST00000505809 469 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms