Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.06□□□□□ -1.92
CDX4O14627 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.06□□□□□ -1.92
CDX4O14627 AL133457.1-201ENST00000564251 987 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.06□□□□□ -1.92
CDX4O14627 MIR4319-201ENST00000577285 85 ntBASIC3.06□□□□□ -1.92
CDX4O14627 MIR4644-201ENST00000579929 84 ntBASIC3.06□□□□□ -1.92
CDX4O14627 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.06□□□□□ -1.92
CDX4O14627 AC109315.1-201ENST00000584143 1347 ntBASIC3.06□□□□□ -1.92
CDX4O14627 PRELID3BP8-201ENST00000604148 295 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AC009220.3-201ENST00000604318 586 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AC073348.1-201ENST00000623002 331 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AC078883.4-201ENST00000623218 367 ntBASIC3.06□□□□□ -1.92
CDX4O14627 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.06□□□□□ -1.92
CDX4O14627 MIR4278-201ENST00000636094 69 ntBASIC3.06□□□□□ -1.92
CDX4O14627 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CDX4O14627 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDX4O14627 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CDX4O14627 AC017071.1-201ENST00000564407 2204 ntBASIC3.05□□□□□ -1.92
CDX4O14627 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.05□□□□□ -1.92
CDX4O14627 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.05□□□□□ -1.92
CDX4O14627 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.05□□□□□ -1.92
CDX4O14627 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDX4O14627 RNU6-216P-201ENST00000363282 104 ntBASIC3.05□□□□□ -1.92
CDX4O14627 Y_RNA.169-201ENST00000363745 96 ntBASIC3.05□□□□□ -1.92
CDX4O14627 RNA5SP189-201ENST00000364920 115 ntBASIC3.05□□□□□ -1.92
CDX4O14627 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDX4O14627 SNORA51.6-201ENST00000384151 125 ntBASIC3.05□□□□□ -1.92
CDX4O14627 RNU6-83P-201ENST00000384568 112 ntBASIC3.05□□□□□ -1.92
CDX4O14627 SNORD15B-201ENST00000384714 146 ntBASIC3.05□□□□□ -1.92
CDX4O14627 AL121972.1-201ENST00000402023 252 ntBASIC3.05□□□□□ -1.92
CDX4O14627 RNU2-37P-201ENST00000410695 177 ntBASIC3.05□□□□□ -1.92
CDX4O14627 RNA5SP184-201ENST00000411071 108 ntBASIC3.05□□□□□ -1.92
CDX4O14627 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.05□□□□□ -1.92
CDX4O14627 RPL31P54-201ENST00000429803 370 ntBASIC3.05□□□□□ -1.92
CDX4O14627 AC022018.1-201ENST00000430685 241 ntBASIC3.05□□□□□ -1.92
CDX4O14627 AF228730.2-201ENST00000438784 848 ntBASIC3.05□□□□□ -1.92
CDX4O14627 RPL23AP76-201ENST00000441860 458 ntBASIC3.05□□□□□ -1.92
CDX4O14627 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.05□□□□□ -1.92
CDX4O14627 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX4O14627 HMGB3P22-202ENST00000451823 572 ntBASIC3.05□□□□□ -1.92
CDX4O14627 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.05□□□□□ -1.92
CDX4O14627 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX4O14627 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.05□□□□□ -1.92
CDX4O14627 AC068724.1-201ENST00000487100 792 ntBASIC3.05□□□□□ -1.92
CDX4O14627 MTCYBP37-201ENST00000510642 1133 ntBASIC3.05□□□□□ -1.92
CDX4O14627 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CDX4O14627 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.05□□□□□ -1.92
CDX4O14627 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX4O14627 SNORA3.4-201ENST00000515969 96 ntBASIC3.05□□□□□ -1.92
CDX4O14627 AL139174.1-201ENST00000531489 886 ntBASIC3.05□□□□□ -1.92
CDX4O14627 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX4O14627 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.05□□□□□ -1.92
CDX4O14627 AC125611.1-201ENST00000549563 229 ntBASIC3.05□□□□□ -1.92
CDX4O14627 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX4O14627 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX4O14627 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX4O14627 OR4K7P-201ENST00000580232 945 ntBASIC3.05□□□□□ -1.92
CDX4O14627 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
CDX4O14627 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX4O14627 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX4O14627 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.05□□□□□ -1.92
CDX4O14627 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.05□□□□□ -1.92
CDX4O14627 AC025588.3-201ENST00000604182 274 ntBASIC3.05□□□□□ -1.92
CDX4O14627 TUSC7.1-201ENST00000610969 165 ntBASIC3.05□□□□□ -1.92
CDX4O14627 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CDX4O14627 uc_338.25-201ENST00000613756 156 ntBASIC3.05□□□□□ -1.92
CDX4O14627 AC008083.4-201ENST00000615076 444 ntBASIC3.05□□□□□ -1.92
CDX4O14627 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.05□□□□□ -1.92
CDX4O14627 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX4O14627 AC092184.1-201ENST00000625042 715 ntBASIC3.05□□□□□ -1.92
CDX4O14627 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDX4O14627 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CDX4O14627 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.04□□□□□ -1.92
CDX4O14627 SNORA31-201ENST00000362607 130 ntBASIC3.04□□□□□ -1.92
CDX4O14627 RNU6-374P-201ENST00000364146 108 ntBASIC3.04□□□□□ -1.92
CDX4O14627 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CDX4O14627 RNU6-1122P-201ENST00000384449 107 ntBASIC3.04□□□□□ -1.92
CDX4O14627 RNU6-837P-201ENST00000391056 108 ntBASIC3.04□□□□□ -1.92
CDX4O14627 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.04□□□□□ -1.92
CDX4O14627 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.04□□□□□ -1.92
CDX4O14627 NUP35P1-201ENST00000422734 947 ntBASIC3.04□□□□□ -1.92
CDX4O14627 USP9YP11-201ENST00000427537 717 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AL035407.1-201ENST00000429211 571 ntBASIC3.04□□□□□ -1.92
CDX4O14627 COX7BP2-201ENST00000437976 242 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AC105272.1-201ENST00000438604 198 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AC016696.1-201ENST00000446949 318 ntBASIC3.04□□□□□ -1.92
CDX4O14627 VN1R10P-201ENST00000447106 875 ntBASIC3.04□□□□□ -1.92
CDX4O14627 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.04□□□□□ -1.92
CDX4O14627 RPS4XP2-201ENST00000458402 793 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AC092757.1-201ENST00000467293 467 ntBASIC3.04□□□□□ -1.92
CDX4O14627 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDX4O14627 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.04□□□□□ -1.92
CDX4O14627 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.04□□□□□ -1.92
CDX4O14627 AC117522.2-201ENST00000510049 657 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AC017037.2-201ENST00000513850 890 ntBASIC3.04□□□□□ -1.92
CDX4O14627 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.04□□□□□ -1.92
CDX4O14627 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.04□□□□□ -1.92
CDX4O14627 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.04□□□□□ -1.92
CDX4O14627 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.04□□□□□ -1.92
CDX4O14627 AL389895.1-201ENST00000554127 252 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms