Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC090281.1-201ENST00000523019 276 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM38O00635 OR5AL2P-201ENST00000532185 920 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM38O00635 AC018630.1-201ENST00000541376 925 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM38O00635 TVP23BP1-201ENST00000557500 617 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM38O00635 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM38O00635 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM38O00635 RN7SL600P-201ENST00000581811 299 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM38O00635 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.27□□□□□ -1.73
TRIM38O00635 SNRPGP15-201ENST00000600149 222 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM38O00635 Z98200.1-201ENST00000607298 470 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 AL589743.7-201ENST00000612637 233 ntBASIC4.27□□□□□ -1.73
TRIM38O00635 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM38O00635 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM38O00635 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM38O00635 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM38O00635 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM38O00635 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
TRIM38O00635 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM38O00635 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM38O00635 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM38O00635 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM38O00635 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRIM38O00635 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM38O00635 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM38O00635 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM38O00635 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRIM38O00635 RNA5SP283-201ENST00000365604 119 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM38O00635 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM38O00635 AL359837.1-201ENST00000381357 287 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 RNU6-1207P-201ENST00000384343 107 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRIM38O00635 PPIAP31-201ENST00000405422 495 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM38O00635 AC092447.6-201ENST00000414578 210 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM38O00635 AL137014.1-201ENST00000420490 1226 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM38O00635 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM38O00635 AL445669.1-201ENST00000426743 755 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.26□□□□□ -1.73
TRIM38O00635 AC000111.3-201ENST00000433478 193 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM38O00635 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM38O00635 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM38O00635 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM38O00635 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.26□□□□□ -1.73
TRIM38O00635 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM38O00635 SNRPFP4-201ENST00000456366 242 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 SNORD121B-201ENST00000458838 81 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 AP000873.1-201ENST00000463987 400 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
TRIM38O00635 AC021382.1-201ENST00000483523 359 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 ARL4AP2-201ENST00000507378 601 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM38O00635 SAP18P1-201ENST00000512058 390 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 AC023141.12-201ENST00000512399 199 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM38O00635 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM38O00635 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM38O00635 AC012182.1-201ENST00000570133 895 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM38O00635 MTCO3P13-201ENST00000577757 781 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM38O00635 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM38O00635 AC006130.2-201ENST00000586202 326 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 AC010928.3-201ENST00000587712 541 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM38O00635 AP001836.1-201ENST00000604675 523 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 MIR432-201ENST00000606207 94 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 MIR6867-201ENST00000610636 67 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 RMST_9.1-201ENST00000619945 193 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 AC112204.3-201ENST00000623822 332 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 AP005264.7-201ENST00000625003 745 ntBASIC4.26□□□□□ -1.73
TRIM38O00635 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM38O00635 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRIM38O00635 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM38O00635 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM38O00635 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TRIM38O00635 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM38O00635 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TRIM38O00635 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
TRIM38O00635 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM38O00635 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TRIM38O00635 RNU5F-7P-201ENST00000363696 115 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 RNU6-853P-201ENST00000364306 107 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM38O00635 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM38O00635 RNU6-1042P-201ENST00000384204 107 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 RNY3P10-201ENST00000384764 102 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 FGF7P8-201ENST00000402994 292 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 RNU6-628P-201ENST00000410675 107 ntBASIC4.25□□□□□ -1.73
TRIM38O00635 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM38O00635 MTCO3P12-201ENST00000416718 547 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms