Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
RFXAPO00287 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFXAPO00287 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.88□□□□□ -1.63
RFXAPO00287 MIR383-201ENST00000362257 73 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 RNU5E-8P-201ENST00000363502 116 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 OR52E6-202ENST00000379946 954 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AL590762.2-201ENST00000395798 571 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 PTMAP2-201ENST00000397627 327 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 MIR548K-201ENST00000408406 116 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
RFXAPO00287 RNU4-26P-201ENST00000410270 107 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 CBX1P3-201ENST00000413296 527 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.88□□□□□ -1.63
RFXAPO00287 RPS15AP12-201ENST00000419498 388 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.88□□□□□ -1.63
RFXAPO00287 RPL7P2-201ENST00000427639 268 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.88□□□□□ -1.63
RFXAPO00287 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.88□□□□□ -1.63
RFXAPO00287 AC119618.1-201ENST00000434191 222 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 RPS20P32-201ENST00000456044 356 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 RNU7-27P-201ENST00000459281 62 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AC098583.1-201ENST00000480875 255 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AC083904.1-201ENST00000487828 231 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 MTCO1P29-201ENST00000496868 288 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.88□□□□□ -1.63
RFXAPO00287 HSPD1P15-201ENST00000505573 1122 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFXAPO00287 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.88□□□□□ -1.63
RFXAPO00287 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.88□□□□□ -1.63
RFXAPO00287 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.88□□□□□ -1.63
RFXAPO00287 RNU6-1038P-201ENST00000516516 104 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 RNA5SP337-201ENST00000517007 109 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 RNU6-1213P-201ENST00000517075 94 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.88□□□□□ -1.63
RFXAPO00287 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.88□□□□□ -1.63
RFXAPO00287 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.88□□□□□ -1.63
RFXAPO00287 HMGB1P41-201ENST00000520234 440 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AP000827.1-201ENST00000527814 258 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.88□□□□□ -1.63
RFXAPO00287 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFXAPO00287 TRAV8-5-201ENST00000537369 341 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 OR4T1P-201ENST00000554933 911 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AL118558.2-201ENST00000556294 238 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.88□□□□□ -1.63
RFXAPO00287 AC010653.1-201ENST00000571108 881 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.88□□□□□ -1.63
RFXAPO00287 AC008687.2-201ENST00000597865 520 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AC007485.1-201ENST00000616755 206 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 AC244100.1-202ENST00000621554 382 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.88□□□□□ -1.63
RFXAPO00287 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RFXAPO00287 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFXAPO00287 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RFXAPO00287 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFXAPO00287 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFXAPO00287 MTND5P19-201ENST00000424872 1794 ntBASIC4.88□□□□□ -1.63
RFXAPO00287 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RFXAPO00287 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RFXAPO00287 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.88□□□□□ -1.63
RFXAPO00287 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFXAPO00287 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFXAPO00287 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFXAPO00287 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.88□□□□□ -1.63
RFXAPO00287 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RFXAPO00287 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.87□□□□□ -1.63
RFXAPO00287 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
RFXAPO00287 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFXAPO00287 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RFXAPO00287 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
RFXAPO00287 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RFXAPO00287 Y_RNA.5-201ENST00000362334 102 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 RNU6-1097P-201ENST00000363586 107 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFXAPO00287 RNU6-38P-201ENST00000384085 107 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 Z98745.1-201ENST00000402553 494 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 RPL31P52-201ENST00000407532 367 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 MIR548I3-201ENST00000408378 149 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 MIR548I1-201ENST00000408810 149 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 RNU6-193P-201ENST00000410977 107 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFXAPO00287 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.87□□□□□ -1.63
RFXAPO00287 GOT2P5-201ENST00000433995 546 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 RPL21P23-201ENST00000446654 460 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 AC104058.1-201ENST00000448028 297 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 RPL30P15-201ENST00000457129 321 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 RNU6-333P-201ENST00000459117 107 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 RPL21P71-201ENST00000465598 459 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 ENPP7P11-201ENST00000505915 627 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 AC091885.1-201ENST00000506658 268 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.87□□□□□ -1.63
RFXAPO00287 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 RNU6-864P-201ENST00000516256 108 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 RNU6-764P-201ENST00000516396 105 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 IGKV2-23-201ENST00000518729 323 ntBASIC4.87□□□□□ -1.63
RFXAPO00287 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.87□□□□□ -1.63
RFXAPO00287 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.87□□□□□ -1.63
RFXAPO00287 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.87□□□□□ -1.63
RFXAPO00287 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.87□□□□□ -1.63
RFXAPO00287 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms