Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.58□□□□□ -1.2
SPDYE4A6NLX3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
SPDYE4A6NLX3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SPDYE4A6NLX3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
SPDYE4A6NLX3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SPDYE4A6NLX3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 BRAFP1-201ENST00000445336 2703 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 RNU4-80P-201ENST00000363200 141 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 RNA5SP333-201ENST00000363466 118 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 RNU6-105P-201ENST00000363909 104 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 RNA5SP334-201ENST00000364825 118 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 Y_RNA.319-201ENST00000365138 92 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 RNU4-11P-201ENST00000365287 132 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 SNORA11.3-201ENST00000408471 128 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 TRAPPC2P10-201ENST00000415662 323 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 PTGES3P4-201ENST00000426243 356 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 SNORA11.6-201ENST00000619030 128 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 AC089999.3-201ENST00000622440 577 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 AC111152.1-202ENST00000635848 339 ntBASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SPDYE4A6NLX3 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 AL355834.1-201ENST00000556602 3965 ntBASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 SNORA63.4-201ENST00000362763 126 ntBASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 Y_RNA.245-201ENST00000364493 95 ntBASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 EBAG9P1-201ENST00000418955 543 ntBASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 AC083855.1-201ENST00000440041 258 ntBASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 GEMIN8P3-201ENST00000445417 720 ntBASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 RN7SL775P-201ENST00000498361 336 ntBASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 Y_RNA.797-201ENST00000515977 94 ntBASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 AC120036.3-201ENST00000517826 292 ntBASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 MRPL57P3-201ENST00000619218 176 ntBASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 AC092692.1-201ENST00000623625 2595 ntBASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SPDYE4A6NLX3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 RNU6-1272P-201ENST00000362776 107 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 RNU6-137P-201ENST00000363680 108 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 MIR514A1-201ENST00000385133 98 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 RNU6-1055P-201ENST00000391085 107 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 HLFP1-201ENST00000402375 499 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 PRELID1P1-201ENST00000403549 660 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 AC091390.3-201ENST00000426478 338 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 BTF3P11-201ENST00000426582 477 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 GSTM5P1-201ENST00000434751 660 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 snoU109.2-201ENST00000459316 135 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 RN7SL143P-201ENST00000496780 297 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 SNRPCP2-201ENST00000504370 475 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 AC027369.5-201ENST00000533838 755 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 AC069307.1-201ENST00000602820 447 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 AL670379.2-201ENST00000604983 252 ntBASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC7.55□□□□□ -1.2
SPDYE4A6NLX3 AC211486.4-201ENST00000621495 113 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms