Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC012065.4-201ENST00000602445 679 ntBASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 AP001330.4-201ENST00000604350 154 ntBASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC006077.1-201ENST00000604746 343 ntBASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNU1-30P-201ENST00000606575 163 ntBASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL355810.1-201ENST00000614629 552 ntBASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 MIR6130-201ENST00000619419 109 ntBASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL357559.1-201ENST00000622228 274 ntBASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC025048.6-202ENST00000627667 438 ntBASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.15□□□□□ -1.91
TRBV5-5A0A0J9YX44 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNU5E-5P-201ENST00000365379 116 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNU6-533P-201ENST00000384144 107 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNU2-37P-201ENST00000410695 177 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNU6-516P-201ENST00000411381 104 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 CRYBB2P1-203ENST00000415709 538 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC068533.1-201ENST00000418542 415 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 SEPT2P1-201ENST00000419651 180 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPL17P36-201ENST00000420302 549 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPL31P12-201ENST00000422587 358 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 BRWD1P3-201ENST00000428816 390 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPL22P17-201ENST00000438729 315 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC239367.2-201ENST00000447309 705 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPS3AP46-201ENST00000448352 682 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPL23AP31-201ENST00000456160 467 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPL21P104-201ENST00000464143 478 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPL23AP14-201ENST00000468281 468 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPL7P19-201ENST00000469948 618 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC021205.2-201ENST00000480069 347 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 NIPA2P2-201ENST00000496376 1083 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC112204.1-201ENST00000502591 103 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 VN1R104P-201ENST00000505115 1009 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 SNORA31.9-201ENST00000516429 84 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 IGHV3-32-201ENST00000519182 355 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC060788.1-201ENST00000521318 469 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 HMGN1P28-201ENST00000521340 364 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 CR383656.6-201ENST00000550518 394 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 VN1R79P-201ENST00000593540 513 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL591034.3-201ENST00000605511 685 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL451086.1-201ENST00000605596 223 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC068276.1-201ENST00000605793 379 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 OR10AB1P-201ENST00000609613 938 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL158063.1-201ENST00000615349 536 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 TAB3P1-202ENST00000452645 1634 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC116096.1-201ENST00000566804 2314 ntBASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
TRBV5-5A0A0J9YX44 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 AL121657.1-201ENST00000327215 531 ntBASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 AC007685.1-201ENST00000329806 452 ntBASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 Y_RNA.77-201ENST00000362962 107 ntBASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 U3.4-201ENST00000363352 213 ntBASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 RNU4-40P-201ENST00000364351 143 ntBASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPS20P2-201ENST00000402520 389 ntBASIC3.13□□□□□ -1.91
TRBV5-5A0A0J9YX44 RPS3AP24-201ENST00000407896 734 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms