Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SNORA38-201ENST00000363946 132 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 SNORA48.3-201ENST00000391081 134 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 AC073264.1-201ENST00000411508 416 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 AL356320.2-201ENST00000417263 507 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 RPS15AP28-201ENST00000435088 386 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 RNF2P1-201ENST00000442955 1010 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 COX6CP12-201ENST00000446748 202 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 snoU13.7-201ENST00000459220 104 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 AC097493.1-201ENST00000463958 372 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 RN7SL636P-201ENST00000497504 294 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 RNA5SP364-201ENST00000516938 78 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 EIF4BP1-201ENST00000554881 351 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 AGGF1P5-201ENST00000567900 919 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 AC090525.3-201ENST00000605601 189 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 BNIP3P7-201ENST00000605641 516 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 AL513477.2-201ENST00000607858 568 ntBASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV30A0A087WSZ9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC131280.1-202ENST00000624067 4211 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 SNORA11.1-201ENST00000408133 129 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 SNORD23.1-201ENST00000408212 104 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 SNORA11-201ENST00000408789 128 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC107081.1-201ENST00000414975 361 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 NANOGP5-201ENST00000424456 877 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 RPL23AP83-201ENST00000434984 473 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 RPS3P1-201ENST00000456781 192 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC004263.1-201ENST00000479327 332 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC096576.1-201ENST00000489014 359 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC090453.1-201ENST00000495560 436 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 MTCYBP20-201ENST00000524239 1129 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 CYCSP26-201ENST00000534107 320 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 ANP32BP3-201ENST00000559213 706 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 MIR3117-201ENST00000584034 78 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC008749.1-201ENST00000597650 306 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 AC025034.2-201ENST00000623264 286 ntBASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV30A0A087WSZ9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 RNA5SP138-201ENST00000365098 114 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 RNU6-1293P-201ENST00000384077 107 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 SNORA67.4-201ENST00000384688 142 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 MIR17-201ENST00000385012 84 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 Z92545.1-201ENST00000411782 234 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 NPM1P11-201ENST00000417106 855 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AC234782.4-201ENST00000417646 1048 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 ARL2BPP3-201ENST00000421226 480 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AL831737.1-201ENST00000441288 271 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AC108120.2-201ENST00000512973 294 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 BTF3P12-201ENST00000519620 469 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 HSPE1P3-201ENST00000559254 309 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AC010546.1-201ENST00000569391 485 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 MIR3200-201ENST00000580767 85 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AC026790.2-201ENST00000606282 430 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AL359535.1-201ENST00000612100 1087 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AC005332.10-201ENST00000612725 619 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AC092650.2-201ENST00000619984 902 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AC009831.4-201ENST00000620744 325 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 RNU6-156P-201ENST00000621869 107 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 AC008669.1-201ENST00000565823 2178 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 ZNF90P1-201ENST00000480493 1951 ntBASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV30A0A087WSZ9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AC010680.1-201ENST00000590024 3590 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 AL359715.4-201ENST00000606629 1436 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 SNORA3A-201ENST00000364113 130 ntBASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV30A0A087WSZ9 U3.26-201ENST00000391236 204 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms