Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 IQCB2P-201ENST00000401788 1633 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 AC027287.1-201ENST00000553115 1453 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
GPC6Q9Y625 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GPC6Q9Y625 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 AC097461.1-201ENST00000568928 2821 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
GPC6Q9Y625 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GPC6Q9Y625 SELENOWP1-201ENST00000322792 252 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GPC6Q9Y625 RNY1P16-201ENST00000363063 111 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 RN7SKP115-201ENST00000363177 317 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 RNU6-263P-201ENST00000363811 107 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 Y_RNA.276-201ENST00000364732 109 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 AL590704.1-201ENST00000402856 794 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 RNA5SP178-201ENST00000410380 128 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 EI24P4-201ENST00000423683 1078 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
GPC6Q9Y625 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 AC105384.2-201ENST00000508433 640 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 SCARNA18.1-201ENST00000516330 83 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 RNU6-352P-201ENST00000516908 107 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 AC012339.2-201ENST00000523996 453 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
GPC6Q9Y625 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 AC092121.1-201ENST00000569452 202 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 MIR3936-201ENST00000584304 110 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 AL136131.3-201ENST00000607600 188 ntBASIC5.43□□□□□ -1.54
GPC6Q9Y625 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
GPC6Q9Y625 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GPC6Q9Y625 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GPC6Q9Y625 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GPC6Q9Y625 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC009951.1-201ENST00000623674 2614 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
GPC6Q9Y625 AL121886.1-201ENST00000358609 435 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 RN7SKP145-201ENST00000363291 303 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 RNU6-398P-201ENST00000384143 109 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 Y_RNA.480-201ENST00000384364 102 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 MIR625-201ENST00000385047 85 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 RNA5SP91-201ENST00000390902 119 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC110754.1-201ENST00000399740 601 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 AL138885.1-201ENST00000405921 675 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC096921.1-201ENST00000411661 375 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 AL137014.1-201ENST00000420490 1226 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 RPL24P2-201ENST00000421023 475 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 RNU1-88P-201ENST00000459274 128 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 RPL37P6-201ENST00000460682 294 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 TRBVB-201ENST00000477100 408 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 ACA59.1-201ENST00000515966 143 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 RN7SKP238-201ENST00000516483 249 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 Y_RNA.687-201ENST00000516558 91 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 RNU6-897P-201ENST00000517135 105 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 ERHP1-201ENST00000523006 310 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC090022.1-201ENST00000546569 311 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 CYCSP38-201ENST00000559840 322 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC012433.1-201ENST00000588916 398 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 OR1M4P-201ENST00000589199 287 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC073410.2-201ENST00000603240 332 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 AL160281.1-201ENST00000605307 311 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC064801.1-201ENST00000612025 407 ntBASIC5.42□□□□□ -1.54
GPC6Q9Y625 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
GPC6Q9Y625 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
GPC6Q9Y625 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GPC6Q9Y625 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GPC6Q9Y625 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.41□□□□□ -1.54
GPC6Q9Y625 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms