Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RPL23AP2-201ENST00000471227 466 ntBASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 RNU6-914P-201ENST00000516749 109 ntBASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 AC138207.8-204ENST00000579588 527 ntBASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 MIR212-201ENST00000586026 110 ntBASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 B3GNTL1P2-201ENST00000603673 288 ntBASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 AC005261.2-201ENST00000593427 4258 ntBASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
VPS9D1Q9Y2B5 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AC110491.1-201ENST00000562191 2010 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AC020656.2-201ENST00000613291 5309 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AL359976.1-201ENST00000418655 3528 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 RN7SKP292-201ENST00000365522 317 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 RNU6-1144P-201ENST00000384247 104 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 RNU6-1179P-201ENST00000384667 107 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AC063979.1-201ENST00000415539 377 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 Z82188.1-201ENST00000436709 154 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 POLR2KP2-201ENST00000438155 177 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 GAPDHP25-201ENST00000447061 1001 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AC073587.1-201ENST00000447093 876 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 TOMM22P6-201ENST00000465035 409 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 RN7SL741P-201ENST00000482473 289 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 SNRPCP11-201ENST00000492453 205 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AC133555.2-201ENST00000550213 292 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AKAP17BP-201ENST00000431706 2719 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 AC024587.1-201ENST00000505925 2157 ntBASIC6.23□□□□□ -1.41
VPS9D1Q9Y2B5 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AC100778.3-201ENST00000580060 1750 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RNVU1-3-201ENST00000364313 161 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RNU6-827P-201ENST00000365553 106 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 Y_RNA.420-201ENST00000384043 110 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RNU6-211P-201ENST00000384047 107 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 PRELID1P1-201ENST00000403549 660 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 SNRPEP6-201ENST00000407465 277 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RN7SKP151-201ENST00000410230 316 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RANP8-201ENST00000444720 713 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AC016700.2-201ENST00000446011 156 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RPS27AP3-201ENST00000453803 454 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RN7SL39P-201ENST00000462264 297 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 GM2AP2-201ENST00000491764 562 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RN7SKP183-201ENST00000517169 324 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 MIR3157-201ENST00000578688 85 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RN7SL66P-201ENST00000582099 264 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 NPIPB1P-202ENST00000588786 828 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 AL034351.1-201ENST00000605288 668 ntBASIC6.22□□□□□ -1.41
VPS9D1Q9Y2B5 RMST_4.1-201ENST00000616886 107 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms