Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 MIR1276-201ENST00000408707 83 ntBASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 AL451074.3-201ENST00000437709 472 ntBASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 MLLT10P2-201ENST00000506434 249 ntBASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 TMEM248P1-201ENST00000510579 951 ntBASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 AC016877.3-201ENST00000606778 504 ntBASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 ZNF271P-202ENST00000465539 1970 ntBASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 AF127577.6-201ENST00000623352 2191 ntBASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHANK2Q9UPX8 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.9□□□□□ -1.94
SHANK2Q9UPX8 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.9□□□□□ -1.94
SHANK2Q9UPX8 MIR5089-201ENST00000580047 84 ntBASIC2.9□□□□□ -1.94
SHANK2Q9UPX8 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.9□□□□□ -1.94
SHANK2Q9UPX8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 AL592437.2-201ENST00000421655 2434 ntBASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 ZNF720P1-201ENST00000562403 1939 ntBASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 HMGN2P35-201ENST00000412164 270 ntBASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 SEC63P1-201ENST00000425785 1258 ntBASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 IFNWP4-201ENST00000453148 294 ntBASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 AC000123.2-201ENST00000623124 461 ntBASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.9□□□□□ -1.95
SHANK2Q9UPX8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 AL353597.2-202ENST00000434901 373 ntBASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 AC092798.1-201ENST00000458542 409 ntBASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 AP001542.2-201ENST00000593141 364 ntBASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 AC009314.1-201ENST00000603871 304 ntBASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 AC010872.1-201ENST00000624225 675 ntBASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 AC138649.5-201ENST00000637456 137 ntBASIC2.89□□□□□ -1.95
SHANK2Q9UPX8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 SNORA51.11-201ENST00000384442 131 ntBASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 AL021407.1-201ENST00000404531 386 ntBASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 AL157827.1-201ENST00000447622 132 ntBASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 RPL23AP7-203ENST00000449021 469 ntBASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 RNU7-157P-201ENST00000459600 66 ntBASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 AC090071.1-201ENST00000507713 644 ntBASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 OR8X1P-201ENST00000534542 869 ntBASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 DNAJC19P9-201ENST00000555084 351 ntBASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 AC103810.1-201ENST00000579873 453 ntBASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 VIS1.1-201ENST00000610517 203 ntBASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SHANK2Q9UPX8 MIR591-201ENST00000385290 95 ntBASIC2.87□□□□□ -1.95
SHANK2Q9UPX8 HMGB1P10-201ENST00000395823 563 ntBASIC2.87□□□□□ -1.95
SHANK2Q9UPX8 HMGB1P13-201ENST00000406019 642 ntBASIC2.87□□□□□ -1.95
SHANK2Q9UPX8 HIGD1AP11-201ENST00000438361 280 ntBASIC2.87□□□□□ -1.95
SHANK2Q9UPX8 SNRPGP3-201ENST00000469405 227 ntBASIC2.87□□□□□ -1.95
SHANK2Q9UPX8 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.87□□□□□ -1.95
SHANK2Q9UPX8 SNORA31.15-201ENST00000516771 132 ntBASIC2.87□□□□□ -1.95
SHANK2Q9UPX8 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.87□□□□□ -1.95
SHANK2Q9UPX8 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.87□□□□□ -1.95
SHANK2Q9UPX8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHANK2Q9UPX8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SHANK2Q9UPX8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 SET-203ENST00000372688 801 ntTSL 2 BASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 UBE2V2P1-201ENST00000434717 398 ntBASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 RPL23AP20-201ENST00000447965 421 ntBASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 MTAPP1-201ENST00000489154 819 ntBASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 AC117532.1-201ENST00000514638 323 ntBASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 COX6CP5-201ENST00000527162 228 ntBASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 RMST_2.1-201ENST00000617263 136 ntBASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SHANK2Q9UPX8 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 AC011155.1-201ENST00000316512 456 ntBASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 HSPE1P28-201ENST00000443139 211 ntBASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 AC025033.1-201ENST00000463883 194 ntBASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 RN7SKP234-201ENST00000517173 224 ntBASIC2.85□□□□□ -1.95
SHANK2Q9UPX8 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms