Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
MACF1Q9UPN3 MTCO1P48-201ENST00000448024 1096 ntBASIC0.93□□□□□ -2.26
MACF1Q9UPN3 CALM1P2-201ENST00000452941 448 ntBASIC0.93□□□□□ -2.26
MACF1Q9UPN3 AC024405.2-202ENST00000532731 184 ntBASIC0.93□□□□□ -2.26
MACF1Q9UPN3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC0.93□□□□□ -2.26
MACF1Q9UPN3 AC104389.3-201ENST00000445629 235 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AP001960.1-201ENST00000506494 658 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 OR4A45P-201ENST00000529954 901 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AL109933.3-201ENST00000619095 188 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 Y_RNA.468-201ENST00000384298 102 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 RNU6-1064P-201ENST00000410626 104 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC107393.1-201ENST00000512403 346 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC146944.4-201ENST00000602697 718 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 Y_RNA.146-201ENST00000363549 102 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 RNU6-1104P-201ENST00000384723 104 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC093716.1-201ENST00000435923 377 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AL645939.1-201ENST00000453429 797 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC108734.3-201ENST00000481241 1165 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 MIR3186-201ENST00000577404 85 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 RNA5SP146-201ENST00000410743 123 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 ARL4AP3-201ENST00000441452 574 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 ALDH7A1P3-201ENST00000492517 345 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 RPS27P27-201ENST00000498779 255 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 MIR486-1-201ENST00000612171 68 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 Y_RNA.65-201ENST00000362846 100 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 RNA5SP489-201ENST00000410986 109 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 RPL27AP8-201ENST00000424277 446 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 RPL30P6-201ENST00000475925 342 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 LSM3P2-201ENST00000551246 273 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 Y_RNA.169-201ENST00000363745 96 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 RN7SKP200-201ENST00000410564 320 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 OR6C64P-201ENST00000419708 825 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 EIF1P1-201ENST00000421436 341 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC098826.1-201ENST00000433943 471 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 RPL23AP22-201ENST00000437556 453 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC025260.1-201ENST00000548858 430 ntBASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 WARS-244ENST00000627608 123 ntTSL 5 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC0.92□□□□□ -2.26
MACF1Q9UPN3 AC005336.3-201ENST00000623833 2679 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 MTND4P1-201ENST00000457501 1466 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 SSR1P1-201ENST00000407630 814 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AC080125.1-201ENST00000414888 684 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 RAC1P8-201ENST00000427086 527 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AC002553.2-201ENST00000453217 340 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AL669942.2-201ENST00000620352 697 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 MTND5P10-201ENST00000603719 1809 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AL358178.1-201ENST00000407698 397 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 VN1R17P-201ENST00000472048 1090 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 HMGB1P1-201ENST00000522557 636 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 FAM157A-202ENST00000615155 405 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AC008264.2-201ENST00000610193 3731 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 SGO1P2-201ENST00000429458 1589 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AL121769.1-201ENST00000469473 401 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 CENPUP1-201ENST00000526649 1202 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 RPS3AP1-201ENST00000413190 320 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AC146507.1-201ENST00000468335 354 ntBASIC0.91□□□□□ -2.26
MACF1Q9UPN3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.91□□□□□ -2.26
MACF1Q9UPN3 AC245517.5-201ENST00000611529 162 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms