Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 LINC01355-201ENST00000566551 5444 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 MT-TD-201ENST00000387419 68 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 MIR454-201ENST00000390180 115 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 HDGFP1-201ENST00000405943 252 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 AL354719.1-201ENST00000406535 843 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 RNU6-1068P-201ENST00000410958 103 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 EIF4EP1-201ENST00000422311 642 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 RPL23AP1-201ENST00000428990 471 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 AL138799.3-201ENST00000438968 350 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 AC005094.1-201ENST00000440420 368 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 AC007967.1-201ENST00000455422 1159 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 RPS15AP36-201ENST00000492022 382 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 HMGN1P12-201ENST00000499125 195 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 RNU6-1095P-201ENST00000516148 108 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 RNU6-709P-201ENST00000517257 104 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 AC093249.4-201ENST00000564755 259 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 RMST_3.1-201ENST00000611651 109 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 MIR6130-201ENST00000619419 109 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 AC079684.1-201ENST00000621405 437 ntBASIC5.38□□□□□ -1.55
DDX41Q9UJV9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
DDX41Q9UJV9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 RNU1-20P-201ENST00000363314 162 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 RNU1-83P-201ENST00000363426 164 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 Y_RNA.279-201ENST00000364763 95 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 SNORD37.1-201ENST00000390968 65 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AL080315.1-201ENST00000406055 466 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 UBE2FP1-201ENST00000416536 447 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 EIF4HP2-201ENST00000424380 563 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 C4BPAP2-201ENST00000428434 478 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 HMGB3P9-201ENST00000441799 583 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AC093019.1-201ENST00000443135 252 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 UBE2V1P7-201ENST00000446395 340 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 ELOCP23-201ENST00000452014 332 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 RNU7-182P-201ENST00000459009 62 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AC233702.1-201ENST00000482905 502 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AC139783.2-201ENST00000504847 1145 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AC116562.3-201ENST00000506136 177 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AC068587.5-201ENST00000528506 175 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 MIR4715-201ENST00000584117 79 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AL035413.2-201ENST00000604801 525 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AC009643.2-201ENST00000603543 1448 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 MTND5P17-201ENST00000418405 1603 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.37□□□□□ -1.55
DDX41Q9UJV9 MTND5P3-201ENST00000438536 1800 ntBASIC5.37□□□□□ -1.55
DDX41Q9UJV9 Y_RNA.22-201ENST00000362492 102 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 SNORA62-201ENST00000365493 153 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 RNU1-82P-201ENST00000390851 165 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 RNA5SP397-201ENST00000391323 118 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AL451139.1-201ENST00000434718 346 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.36□□□□□ -1.55
DDX41Q9UJV9 RPS27AP17-201ENST00000463344 455 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AC010469.1-201ENST00000463864 576 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 GMFBP1-201ENST00000467831 427 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 RPS27AP1-201ENST00000475545 471 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AC108145.1-201ENST00000503770 153 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AC026427.2-201ENST00000506228 536 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AC010486.1-201ENST00000511793 424 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 RNU4-60P-201ENST00000517239 135 ntBASIC5.36□□□□□ -1.55
DDX41Q9UJV9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.36□□□□□ -1.55
DDX41Q9UJV9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.36□□□□□ -1.55
DDX41Q9UJV9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms