Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC068533.1-201ENST00000418542 415 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 RPS12P23-201ENST00000419579 400 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AC006989.1-201ENST00000427212 131 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 USP9YP14-201ENST00000430663 563 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 LSM1P1-201ENST00000438629 273 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AL358232.1-201ENST00000448030 501 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 MTCO1P27-201ENST00000448269 226 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 MTCO3P20-201ENST00000454926 688 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AC087385.1-201ENST00000475062 312 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 RN7SL293P-201ENST00000481765 281 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AC026333.2-201ENST00000542164 106 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX4Q9UIU6 CBX3P5-201ENST00000552017 521 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 HSPE1P3-201ENST00000559254 309 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 BNIP3P23-201ENST00000599655 511 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AC068792.1-201ENST00000621354 417 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AL590240.3-201ENST00000621416 943 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 U6.105-201ENST00000637379 88 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 AL022578.1-201ENST00000439330 1433 ntBASIC3.77□□□□□ -1.81
SIX4Q9UIU6 MTND4P4-201ENST00000439033 1366 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC130650.2-201ENST00000618736 2403 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AL049781.1-201ENST00000623195 3585 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC068647.1-201ENST00000489539 2265 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 RNU4-35P-201ENST00000362588 141 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 RNU6-289P-201ENST00000364093 107 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 MIR124-3-201ENST00000384866 87 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 MIR183-201ENST00000384958 110 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 RNU6-952P-201ENST00000391164 108 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 RNU2-16P-201ENST00000410712 136 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 CFTRP1-201ENST00000456646 183 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 TPT1P7-201ENST00000458300 517 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 RNA5SP269-201ENST00000459032 137 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC017015.1-201ENST00000477387 286 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AP000797.1-201ENST00000478870 387 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC093809.1-201ENST00000509155 340 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 MTND5P4-201ENST00000514978 288 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC104057.1-201ENST00000515547 497 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 MTCYBP20-201ENST00000524239 1129 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC074029.1-201ENST00000552531 1044 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC091489.2-201ENST00000566263 604 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AP001180.3-201ENST00000582221 145 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC083760.1-201ENST00000589621 670 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC087683.1-201ENST00000591187 441 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC020914.4-201ENST00000597690 277 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC068790.5-201ENST00000602741 355 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC008739.3-201ENST00000603262 127 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AP000403.1-201ENST00000603349 851 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC080078.2-201ENST00000603766 501 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC097468.3-201ENST00000607956 456 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC025588.4-201ENST00000615802 908 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AL391261.4-201ENST00000616012 481 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 AC244205.2-202ENST00000635781 342 ntBASIC3.76□□□□□ -1.81
SIX4Q9UIU6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX4Q9UIU6 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms