Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 SNORA31.15-201ENST00000516771 132 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AC018630.1-201ENST00000541376 925 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 MIR4319-201ENST00000577285 85 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AL137843.1-201ENST00000605078 385 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AL161734.1-201ENST00000609720 557 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AC024595.1-201ENST00000623088 387 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 CYP3A51P-201ENST00000633513 256 ntBASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS29Q9UBQ0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AC062016.1-201ENST00000355719 319 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 RNA5SP393-201ENST00000363423 117 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 RNU6-441P-201ENST00000384545 106 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 RPS15AP38-201ENST00000413110 372 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AL158825.1-201ENST00000414735 521 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AC004022.1-201ENST00000447766 1066 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 SNRPGP6-201ENST00000451124 220 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 CBX3P3-201ENST00000508108 532 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 RNA5SP356-201ENST00000515972 94 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 RN7SKP40-201ENST00000517211 242 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AC025881.1-201ENST00000518851 512 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AC008676.3-201ENST00000521237 435 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AC083923.1-201ENST00000523708 376 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 HMGB1P6-201ENST00000569046 646 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 FAM60BP-201ENST00000578364 658 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 BNIP3P22-201ENST00000593399 556 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AC006329.2-201ENST00000611491 394 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 AC110079.1-202ENST00000635213 138 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 FO624990.1-201ENST00000636373 85 ntBASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS29Q9UBQ0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
VPS29Q9UBQ0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 MTND4LP20-201ENST00000402379 270 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 RNU2-25P-201ENST00000411041 191 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 AC099677.1-201ENST00000420575 175 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 NUP35P1-201ENST00000422734 947 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 AC091390.3-201ENST00000426478 338 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 HSFY3P-201ENST00000444242 1191 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 AC096576.1-201ENST00000489014 359 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 CR589904.2-201ENST00000612533 440 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 AC140725.3-201ENST00000616193 880 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 AC103798.2-201ENST00000624292 632 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS29Q9UBQ0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 MIR627-201ENST00000384979 97 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 AL359511.1-201ENST00000402970 211 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 RNU2-17P-201ENST00000410290 190 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 Z92545.1-201ENST00000411782 234 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 AC092447.6-201ENST00000414578 210 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 AL356320.2-201ENST00000417263 507 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 RPL7P30-201ENST00000420888 709 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 MTND1P33-201ENST00000446251 917 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 MTND2P19-201ENST00000449129 1012 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 AC009961.3-201ENST00000449832 765 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 AL109933.2-201ENST00000452651 260 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 KC877373.1-201ENST00000479066 408 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 RN7SL432P-201ENST00000484057 298 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 MTCO1P47-201ENST00000523889 1271 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 AP000790.1-201ENST00000528891 737 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 AL049779.4-201ENST00000604500 156 ntBASIC2.32□□□□□ -2.04
VPS29Q9UBQ0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms