Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 RNU6-50P-201ENST00000362356 103 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 SNORA71.1-201ENST00000364523 117 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 RNU6-413P-201ENST00000384115 107 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 MIR591-201ENST00000385290 95 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AL136310.1-201ENST00000404926 654 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AL450338.1-201ENST00000407987 512 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 RNA5SP129-201ENST00000410276 118 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 RPS7P13-201ENST00000413955 498 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 MTATP6P20-201ENST00000414147 562 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC092447.6-201ENST00000414578 210 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 PSMA6P3-201ENST00000428242 164 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 MTND4LP10-201ENST00000435146 291 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 MTND2P20-201ENST00000440805 661 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 MTCO2P25-201ENST00000447065 681 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 EXOSC3P1-201ENST00000448649 500 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC125238.1-201ENST00000448842 249 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 RPL7P52-201ENST00000449200 742 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 OFD1P3Y-201ENST00000453312 783 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 HMGN2P16-201ENST00000456802 261 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC026410.2-201ENST00000460281 156 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 RPS27P29-201ENST00000463110 252 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 RPS15AP17-201ENST00000470598 390 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 RPS3AP14-201ENST00000483907 780 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC068724.1-201ENST00000487100 792 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 HMGB3P15-201ENST00000507326 574 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 SLC2A13P1-201ENST00000531560 322 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC005832.3-201ENST00000537929 631 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC018630.1-201ENST00000541376 925 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 HSPE1P3-201ENST00000559254 309 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 H3F3AP1-201ENST00000559984 334 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 MIR4637-201ENST00000582405 84 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AL451007.1-201ENST00000595491 289 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AF131215.7-201ENST00000602443 707 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC091057.3-201ENST00000602684 733 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 AC080013.4-201ENST00000607624 649 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 MIR1322-201ENST00000638013 71 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 ZNF807-201ENST00000328088 1707 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC073325.2-201ENST00000339545 159 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 OR5H2-201ENST00000355273 945 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 NACA3P-201ENST00000359690 648 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 RNU6-805P-201ENST00000365643 106 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 RNU6-1122P-201ENST00000384449 107 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 SKINT1L-201ENST00000401057 817 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AL590084.1-201ENST00000407885 387 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 RPS3AP37-201ENST00000419176 745 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC245291.1-201ENST00000419501 328 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 RPL35AP12-201ENST00000425362 338 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 NANOGP2-201ENST00000435391 727 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC007327.1-201ENST00000447461 264 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AL589880.1-201ENST00000448271 287 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC140076.1-201ENST00000449897 361 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC011979.1-201ENST00000472300 483 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 HMGB1P28-201ENST00000507778 552 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 RNU1-143P-201ENST00000516296 146 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 RNA5SP468-201ENST00000516782 93 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC009812.2-201ENST00000517657 457 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC104986.1-201ENST00000517978 436 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC022080.3-201ENST00000544433 482 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 SYF2P1-201ENST00000550658 413 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 EIF4BP1-201ENST00000554881 351 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 OR4H12P-201ENST00000556269 907 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AL132657.2-201ENST00000564417 358 ntBASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLCF1Q9UBD9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms