Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LRFN1Q9P244 RNA5SP446-201ENST00000515955 82 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 RNA5SP73-201ENST00000516744 108 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 RNU2-46P-201ENST00000517038 113 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 AC100870.1-201ENST00000522035 505 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 AP003033.1-201ENST00000527244 415 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.99□□□□□ -1.77
LRFN1Q9P244 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.99□□□□□ -1.77
LRFN1Q9P244 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.99□□□□□ -1.77
LRFN1Q9P244 MIR3921-201ENST00000577308 85 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 AP001029.3-201ENST00000588063 596 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 AL606834.2-201ENST00000602954 668 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 AC090578.1-201ENST00000604955 591 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LRFN1Q9P244 AL021997.2-201ENST00000615674 271 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.99□□□□□ -1.77
LRFN1Q9P244 AC095031.1-201ENST00000623685 672 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 PISRT1-201ENST00000626175 531 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.99□□□□□ -1.77
LRFN1Q9P244 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.99□□□□□ -1.77
LRFN1Q9P244 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LRFN1Q9P244 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
LRFN1Q9P244 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
LRFN1Q9P244 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
LRFN1Q9P244 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRFN1Q9P244 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRFN1Q9P244 AC138915.3-201ENST00000562908 1389 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LRFN1Q9P244 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.99□□□□□ -1.77
LRFN1Q9P244 AL672167.1-203ENST00000641299 2975 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 SDAD1P2-201ENST00000441308 2028 ntBASIC3.99□□□□□ -1.77
LRFN1Q9P244 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRFN1Q9P244 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRFN1Q9P244 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRFN1Q9P244 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 MIR448-201ENST00000362131 111 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 RNU6-50P-201ENST00000362356 103 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 RNA5SP307-201ENST00000362863 116 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 U8.3-201ENST00000363321 132 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 RNY4P16-201ENST00000364768 94 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRFN1Q9P244 SNORA36C-201ENST00000384289 132 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 Y_RNA.559-201ENST00000384686 107 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 MRPL42P2-201ENST00000403169 426 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 HDGFP1-201ENST00000405943 252 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 RNA5SP129-201ENST00000410276 118 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 RNU2-8P-201ENST00000410727 190 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AL663109.1-201ENST00000411498 844 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 UBE2FP1-201ENST00000416536 447 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 CYCSP43-201ENST00000438233 310 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 MTCO3P45-201ENST00000443036 613 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AL512326.1-201ENST00000443050 721 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC244505.5-201ENST00000443639 207 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 GAPDHP17-201ENST00000449858 1001 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 SNORA84-201ENST00000459229 133 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 HSPE1P6-201ENST00000479457 291 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC108022.1-201ENST00000493466 478 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC008958.1-201ENST00000511047 682 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 IGKV2D-23-201ENST00000518179 286 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRFN1Q9P244 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 ZNF192P1-203ENST00000565888 810 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 MIR4528-201ENST00000577763 90 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC093227.2-201ENST00000589357 285 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC015871.2-201ENST00000603605 948 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AL139286.2-201ENST00000606838 396 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC103710.1-201ENST00000610003 901 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC007546.2-201ENST00000623996 360 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC055839.1-201ENST00000634467 498 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 FARSBP1-201ENST00000435808 1778 ntBASIC3.98□□□□□ -1.77
LRFN1Q9P244 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRFN1Q9P244 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.98□□□□□ -1.77
LRFN1Q9P244 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRFN1Q9P244 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LRFN1Q9P244 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LRFN1Q9P244 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRFN1Q9P244 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRFN1Q9P244 RNU1-108P-201ENST00000362556 161 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 Y_RNA.359-201ENST00000365498 102 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRFN1Q9P244 DEFB109C-201ENST00000382575 264 ntBASIC3.97□□□□□ -1.77
LRFN1Q9P244 DEFB109B-201ENST00000382656 264 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms