Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 HMGB1P15-201ENST00000453854 435 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 AC073901.1-201ENST00000462471 408 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 AC004263.1-201ENST00000479327 332 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 AC107398.1-201ENST00000486904 505 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 SUMO1P1-201ENST00000497904 306 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC88CQ9P219 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC88CQ9P219 AC060766.3-201ENST00000591442 263 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 VIS1.1-201ENST00000610517 203 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC88CQ9P219 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 RPL21P75-201ENST00000396599 483 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 RPL21P28-201ENST00000401418 483 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AL121972.1-201ENST00000402023 252 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AL592114.1-201ENST00000403842 483 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AL591416.1-201ENST00000404015 867 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AL138880.1-201ENST00000405824 642 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 RNU2-21P-201ENST00000410368 188 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 HIGD1AP2-201ENST00000446367 280 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 RPL21P39-201ENST00000463605 483 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AC011979.1-201ENST00000472300 483 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 RPL21P93-201ENST00000480465 489 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AC233702.1-201ENST00000482905 502 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AC093591.1-201ENST00000491435 481 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 RPL23AP49-201ENST00000492925 468 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 RPL21P16-201ENST00000495531 483 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AC025459.1-201ENST00000504072 156 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AL356266.1-201ENST00000623311 483 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 FO624990.1-201ENST00000636373 85 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 OR5H15-201ENST00000383696 930 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 SNORD21-201ENST00000383953 95 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 RNU6-452P-201ENST00000384406 107 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 MIR1303-201ENST00000408625 86 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AL139156.1-201ENST00000412785 841 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 NUP35P2-201ENST00000416748 943 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AP000889.2-201ENST00000532684 490 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 NOP56P3-201ENST00000549457 385 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 SYF2P1-201ENST00000550658 413 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AC107954.1-201ENST00000565906 727 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AC245128.3-201ENST00000594721 748 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AC244517.1-201ENST00000606030 2086 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC88CQ9P219 AC007342.9-201ENST00000623877 1385 ntBASIC2.13□□□□□ -2.07
CCDC88CQ9P219 RNU6-152P-201ENST00000384037 107 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 RNU6-891P-201ENST00000384280 111 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AL512504.1-201ENST00000415494 778 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 RPL23AP39-201ENST00000415533 405 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 RPS7P2-201ENST00000435134 607 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 SYPL1P1-201ENST00000473622 768 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 SEM1P1-201ENST00000506694 209 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AP003467.2-201ENST00000520175 319 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AC009063.1-201ENST00000563342 702 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 MIR1273D-201ENST00000577266 86 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AC103710.2-201ENST00000609912 942 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AC034102.8-201ENST00000615146 484 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AC009831.4-201ENST00000620744 325 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 LINC00216-201ENST00000623548 1126 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AL121594.5-201ENST00000631724 573 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AL136520.1-201ENST00000600311 1322 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AP002907.1-201ENST00000606361 1430 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 RNU6-1181P-201ENST00000384191 106 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AL024474.1-201ENST00000404655 591 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AC109780.2-201ENST00000413467 845 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AC004022.2-201ENST00000413824 193 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 MTCO3P4-201ENST00000419236 787 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 MTCYBP24-201ENST00000420387 1106 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 RPL21P66-201ENST00000426566 466 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC88CQ9P219 AC096992.1-201ENST00000459808 709 ntBASIC2.12□□□□□ -2.07
CCDC88CQ9P219 RPL36AP51-201ENST00000487216 318 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms