Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC097504.2-201ENST00000608088 454 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AL355493.4-201ENST00000618530 292 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AC068880.4-201ENST00000623082 495 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 U6.101-201ENST00000637707 76 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AC006927.2-201ENST00000639256 389 ntBASIC2.61□□□□□ -1.99
CLN6Q9NWW5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.61□□□□□ -1.99
CLN6Q9NWW5 TAB3P1-202ENST00000452645 1634 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 MTCO1P12-201ENST00000414273 1543 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 RNU5B-4P-201ENST00000363508 111 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AC025750.1-201ENST00000399891 379 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AL603865.2-201ENST00000401679 213 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 RNU2-47P-201ENST00000410649 186 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 BTF3P8-201ENST00000414577 526 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AC019178.2-201ENST00000423595 505 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 RPL27AP8-201ENST00000424277 446 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AC017099.1-201ENST00000448261 1028 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 USP9YP34-201ENST00000453983 808 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AC091153.1-201ENST00000466297 402 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 SETP11-201ENST00000473027 690 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 COX7A2P2-201ENST00000505291 250 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 RN7SKP157-201ENST00000516174 282 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AP003355.1-201ENST00000518956 587 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 MIR5680-201ENST00000577577 84 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 GLUD1P4-201ENST00000590914 418 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AC015871.2-201ENST00000603605 948 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 NUTF2P8-201ENST00000604593 363 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AL592148.2-201ENST00000612210 372 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AC109454.4-201ENST00000623411 649 ntBASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.6□□□□□ -1.99
CLN6Q9NWW5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 MIR592-201ENST00000384959 97 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 RN7SKP220-201ENST00000410611 288 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC005300.1-201ENST00000428401 373 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC109583.1-201ENST00000432156 268 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 NDUFB4P6-201ENST00000436819 366 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 RPL23AP74-201ENST00000437246 471 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC034236.1-201ENST00000469891 373 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 VN1R104P-201ENST00000505115 1009 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 MTCO3P27-201ENST00000514397 196 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 SNORA26.10-201ENST00000516427 141 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AP003102.1-201ENST00000525638 661 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AL133271.1-201ENST00000538229 291 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC011260.1-201ENST00000578420 472 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC091057.2-201ENST00000602594 792 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC013444.2-201ENST00000603317 787 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 AC084824.5-201ENST00000612009 413 ntBASIC2.59□□□□□ -1.99
CLN6Q9NWW5 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.59□□□□□ -1.99
CLN6Q9NWW5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.59□□□□□ -2
CLN6Q9NWW5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.59□□□□□ -2
CLN6Q9NWW5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
CLN6Q9NWW5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.59□□□□□ -2
CLN6Q9NWW5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
CLN6Q9NWW5 AP003122.5-201ENST00000527668 3766 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 Y_RNA.25-201ENST00000362528 102 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 SNORA54-201ENST00000384281 123 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms