Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
KLHL1Q9NR64 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KLHL1Q9NR64 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
KLHL1Q9NR64 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 BDP1P-201ENST00000582658 1990 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 RNU6-1119P-201ENST00000384349 108 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 Y_RNA.517-201ENST00000384551 106 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 MIR30B-201ENST00000384850 88 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 U8.14-201ENST00000390843 143 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 DHFRP6-201ENST00000401776 268 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 Y_RNA.599-201ENST00000410489 109 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 Y_RNA.619-201ENST00000410951 90 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC012065.2-201ENST00000421295 375 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 GOT2P5-201ENST00000433995 546 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 RPL23AP74-201ENST00000437246 471 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 LSM1P1-201ENST00000438629 273 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC092641.1-201ENST00000440229 772 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 ARPC3P5-201ENST00000448802 534 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 SUMO2P2-201ENST00000456482 255 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC106872.3-201ENST00000495104 446 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 RPL31P61-201ENST00000496160 376 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC021678.1-201ENST00000505195 936 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 POU5F1P7-201ENST00000508759 541 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AL139174.1-201ENST00000531489 886 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AP004247.1-201ENST00000531556 1289 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AP002453.2-201ENST00000533503 320 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC091489.2-201ENST00000566263 604 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 ZNF415P1-201ENST00000582279 1166 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC087683.1-201ENST00000591187 441 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC091167.4-201ENST00000605079 184 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC097468.3-201ENST00000607956 456 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC015540.1-201ENST00000615828 501 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC027807.2-201ENST00000616099 408 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC009509.4-201ENST00000619202 509 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 CR392039.5-201ENST00000623201 510 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 AC093591.3-201ENST00000634516 308 ntBASIC3.66□□□□□ -1.82
KLHL1Q9NR64 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
KLHL1Q9NR64 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.65□□□□□ -1.82
KLHL1Q9NR64 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KLHL1Q9NR64 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
KLHL1Q9NR64 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KLHL1Q9NR64 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
KLHL1Q9NR64 AL022578.1-201ENST00000439330 1433 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 RPL23AP57-201ENST00000332361 466 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 RNU6-1249P-201ENST00000363237 111 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 RNU6-777P-201ENST00000364265 104 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 RNU6-213P-201ENST00000384051 104 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 AC009237.5-201ENST00000414271 501 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 ARF4P2-201ENST00000430209 526 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 RPL21P112-201ENST00000434403 463 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 MTND1P28-201ENST00000435623 950 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 RPL37P21-201ENST00000435890 276 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 AC091153.1-201ENST00000466297 402 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 RPL31P13-201ENST00000484151 370 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 RN7SL323P-201ENST00000494712 295 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 HMGB1P22-201ENST00000505315 124 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 RNU6-27P-201ENST00000516146 107 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 RNA5SP143-201ENST00000516936 115 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KLHL1Q9NR64 AC091516.1-201ENST00000549191 703 ntBASIC3.65□□□□□ -1.83
KLHL1Q9NR64 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms