Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC117522.3-201ENST00000507974 584 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 RNU6-798P-201ENST00000516912 103 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 SNORA48.10-201ENST00000516965 160 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 RNU1-104P-201ENST00000517280 175 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC011611.1-201ENST00000552179 197 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC090888.1-201ENST00000561335 1141 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC015688.2-201ENST00000584523 262 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC022916.3-201ENST00000592961 742 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC079089.3-201ENST00000603094 673 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC008745.1-201ENST00000604064 271 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AL161734.1-201ENST00000609720 557 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AL355365.1-201ENST00000616480 294 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC006338.2-201ENST00000616864 791 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC244100.1-202ENST00000621554 382 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AL118508.4-201ENST00000624142 1176 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC080188.3-201ENST00000624842 748 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AL355596.1-201ENST00000565399 3996 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC010680.1-201ENST00000590024 3590 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC008568.2-201ENST00000623862 2313 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AC026241.1-201ENST00000517873 2142 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 RNU6-270P-201ENST00000364131 105 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 SNORA67.1-201ENST00000364749 141 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 RNU1-100P-201ENST00000365255 165 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 RPF2P1-201ENST00000424137 906 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AC009414.1-201ENST00000427200 443 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 HSPD1P21-201ENST00000436541 245 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 RPL32P14-201ENST00000463196 378 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AL049714.1-201ENST00000466686 347 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 RPL27AP5-201ENST00000469428 449 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AC147055.4-201ENST00000504399 745 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AC091860.1-201ENST00000505723 432 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 RN7SKP122-201ENST00000515923 296 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 SNORA31.21-201ENST00000517180 77 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 C1GALT1P3-201ENST00000522049 819 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AC068339.2-201ENST00000534395 618 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AC123904.3-201ENST00000547218 814 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 OR4K8P-201ENST00000578842 1048 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 MIR5694-201ENST00000581190 76 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 MIR5092-201ENST00000583139 88 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AL021707.7-201ENST00000607991 416 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 AL161629.2-201ENST00000615347 275 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 ZYXP1-201ENST00000617638 118 ntBASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
VCX3AQ9NNX9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 RNU1-32P-201ENST00000363937 159 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 SNORA5A-201ENST00000384111 134 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AP002784.2-201ENST00000397300 549 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 RNU4-47P-201ENST00000410876 114 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 RNU2-25P-201ENST00000411041 191 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AL121882.1-201ENST00000422893 417 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC234781.2-201ENST00000426370 994 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC009296.1-201ENST00000443146 155 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AL031659.1-201ENST00000447075 539 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 SETP6-201ENST00000479329 568 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 RPL23AP70-201ENST00000483361 460 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 RPS27P26-201ENST00000494583 239 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 NAMPTP2-201ENST00000505629 1115 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 HPRT1P1-201ENST00000509498 657 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 RNU1-95P-201ENST00000516357 160 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 RNU1-128P-201ENST00000516704 160 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 RNU6-928P-201ENST00000516876 104 ntBASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.49□□□□□ -2.01
VCX3AQ9NNX9 OR5B10P-201ENST00000532869 642 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms