Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AL356473.1-201ENST00000406203 1408 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 OR5H2-201ENST00000355273 945 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 RNU6-1074P-201ENST00000383995 104 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 HMGB1P17-201ENST00000403495 628 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 PIGPP2-201ENST00000411569 458 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 VDAC1P3-201ENST00000434069 851 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 MTND5P14-201ENST00000441481 1267 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC002381.1-201ENST00000447049 280 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 RPL36AP33-201ENST00000450395 310 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 snoU109.4-201ENST00000458953 143 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 RPL31P50-201ENST00000471002 296 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC023050.2-201ENST00000544968 387 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 PARP1P2-201ENST00000556806 195 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC010738.1-201ENST00000604970 987 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC112220.3-201ENST00000605502 502 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC019176.2-201ENST00000611579 315 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AL355493.4-201ENST00000618530 292 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AP000676.4-201ENST00000624659 623 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC103706.2-201ENST00000638080 240 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC004925.1-201ENST00000624256 2706 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 OR4G11P-202ENST00000642116 1414 ntBASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
VIPAS39Q9H9C1 AC092447.7-201ENST00000422212 1621 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 MTND4P34-201ENST00000572715 1371 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AC093908.1-201ENST00000623125 8092 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 SPRR2C-201ENST00000290702 219 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 SNORD113-6-201ENST00000363345 75 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 SNORA70.2-201ENST00000364506 135 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 SNORD3H-201ENST00000384486 214 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 RSL24D1P4-201ENST00000400938 484 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 MTND4P13-201ENST00000402078 1023 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AL590004.2-201ENST00000404787 371 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 CRYBB2P1-203ENST00000415709 538 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 RPL36AP36-201ENST00000418616 301 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AL139281.1-201ENST00000422120 335 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 SDCBPP1-201ENST00000440192 890 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 MTND2P19-201ENST00000449129 1012 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AL353691.1-201ENST00000451332 387 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 RPL23AP35-201ENST00000451906 501 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 RPS24P6-201ENST00000452670 400 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 Z82190.1-201ENST00000454534 490 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 VN1R17P-201ENST00000472048 1090 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 HMGB1P36-201ENST00000487709 576 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AC147055.4-201ENST00000504399 745 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AC002456.2-201ENST00000509356 380 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 GMPSP1-201ENST00000514075 579 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 MTCO1P35-201ENST00000515270 228 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 Y_RNA.717-201ENST00000517106 92 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 LRRC34P1-201ENST00000542742 915 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 OR6C7P-201ENST00000547875 934 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 SYF2P1-201ENST00000550658 413 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 MIR5186-201ENST00000577504 120 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 OR4K8P-201ENST00000578842 1048 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 MIR3690-201ENST00000580266 75 ntBASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.26□□□□□ -1.89
VIPAS39Q9H9C1 AC083760.1-201ENST00000589621 670 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms