Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LRRC40Q9H9A6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 DEFB108F-201ENST00000344638 222 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 Y_RNA.25-201ENST00000362528 102 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AL031121.1-201ENST00000406553 254 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 RN7SKP123-201ENST00000410732 291 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 RN7SKP58-201ENST00000411010 305 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 LUZP4P1-201ENST00000415420 344 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 ATG3P1-201ENST00000419507 911 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 SUMO2P2-201ENST00000456482 255 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 RN7SL504P-201ENST00000494496 287 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 PRELID3BP6-201ENST00000503839 571 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AL359273.1-201ENST00000510918 627 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 RNU6-1261P-201ENST00000517194 104 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 DEFB108D-201ENST00000527787 222 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AC138915.2-201ENST00000569776 97 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AC007318.2-201ENST00000620999 243 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AC027309.3-201ENST00000623419 351 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AC010872.1-201ENST00000624225 675 ntBASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LRRC40Q9H9A6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AC008568.2-201ENST00000623862 2313 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AC092435.3-201ENST00000565538 3654 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 RNU6-1197P-201ENST00000391183 107 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 RPL5P18-201ENST00000406671 891 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 MIR1289-1-201ENST00000408836 144 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 RNU2-43P-201ENST00000410306 190 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 RN7SKP27-201ENST00000410684 333 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AC092573.2-201ENST00000434546 243 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 SETP8-201ENST00000435341 628 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 GAPDHP27-201ENST00000447427 1020 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AP001992.1-205ENST00000462248 379 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AL049714.1-201ENST00000466686 347 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 SETP11-201ENST00000473027 690 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 RPS3AP43-201ENST00000479743 781 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AC093801.2-201ENST00000503966 1050 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 MTCO3P27-201ENST00000514397 196 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 MTCO3P15-201ENST00000526563 574 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 MIR1254-2-201ENST00000579553 63 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AP000254.1-201ENST00000609934 520 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 TUG1_1.1-201ENST00000610654 145 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AC084824.5-201ENST00000612009 413 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AC007275.1-201ENST00000621243 671 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AC004009.2-201ENST00000623016 728 ntBASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRRC40Q9H9A6 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 MTND5P1-201ENST00000445440 1375 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 SNORA38.1-201ENST00000364172 131 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 RNU6-707P-201ENST00000364647 95 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 SNORA54-201ENST00000384281 123 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 MIR506-201ENST00000384998 124 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 RN7SKP220-201ENST00000410611 288 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AL358232.1-201ENST00000448030 501 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC010099.1-201ENST00000455434 375 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC117440.1-201ENST00000474107 571 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC006445.1-201ENST00000491925 405 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms