Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 SNRPEP3-201ENST00000338402 276 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 MIR22-201ENST00000362190 85 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 MIR26A1-201ENST00000362205 77 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 RNU6-216P-201ENST00000363282 104 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AL450338.1-201ENST00000407987 512 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 C4BPAP2-201ENST00000428434 478 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 MTND2P5-201ENST00000432656 1006 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AC129850.1-201ENST00000436203 508 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 GTF2IP7-202ENST00000436677 309 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 RPL39P6-201ENST00000448289 150 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 RPL37P4-201ENST00000448908 268 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 PNPLA4P1-201ENST00000458328 305 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AC026410.2-201ENST00000460281 156 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 RPL32P34-201ENST00000486380 400 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AC111000.2-201ENST00000507775 550 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 NPM1P41-201ENST00000512920 831 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 RNA5SP402-201ENST00000517148 110 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 RNU6-1028P-201ENST00000517164 93 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 HPRT1P3-201ENST00000539521 576 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 NCAPGP2-201ENST00000557911 754 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 MIR5708-201ENST00000579723 85 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AC126365.2-201ENST00000580630 379 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 MIR3922-201ENST00000585192 84 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 CKS1BP3-201ENST00000600888 237 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 RPL23AP88-201ENST00000605759 454 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AC005332.6-201ENST00000613178 446 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AL512427.1-201ENST00000618593 349 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AC004009.2-201ENST00000623016 728 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AC244258.1-201ENST00000637553 1071 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 AC009812.4-201ENST00000569134 1805 ntBASIC2.47□□□□□ -2.01
SLIRPQ9GZT3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.46□□□□□ -2.01
SLIRPQ9GZT3 OR6K3-202ENST00000368146 996 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 MIR135A2-201ENST00000384854 100 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 BEND7P1-201ENST00000422058 457 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 RAC1P7-201ENST00000445367 377 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 HMGN1P5-201ENST00000448591 263 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AL109741.2-201ENST00000455561 343 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AP001992.1-205ENST00000462248 379 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 RN7SL863P-201ENST00000462370 296 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 RPS15AP17-201ENST00000470598 390 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 RPL30P14-201ENST00000482744 348 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 OR4G11P-201ENST00000492842 939 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AC016550.1-201ENST00000505348 785 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 SNORA31.15-201ENST00000516771 132 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 HSPE1P3-201ENST00000559254 309 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 GTF2IP8-201ENST00000560687 584 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AL031176.1-201ENST00000604554 466 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AC091046.2-201ENST00000620775 665 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AP003122.6-201ENST00000623831 495 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AC018692.3-201ENST00000623929 123 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AP003485.1-201ENST00000625093 753 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 AC011460.1-201ENST00000636268 1834 ntBASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.46□□□□□ -2.02
SLIRPQ9GZT3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.45□□□□□ -2.02
SLIRPQ9GZT3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
SLIRPQ9GZT3 SNORA70.2-201ENST00000364506 135 ntBASIC2.45□□□□□ -2.02
SLIRPQ9GZT3 SNORA9.2-201ENST00000365361 133 ntBASIC2.45□□□□□ -2.02
SLIRPQ9GZT3 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.45□□□□□ -2.02
SLIRPQ9GZT3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms