Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RNU6-718P-201ENST00000516166 105 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RNU6-1178P-201ENST00000516674 107 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RNU6-445P-201ENST00000516949 107 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AC011979.2-201ENST00000527568 352 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AL121603.1-201ENST00000553815 142 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AL133153.1-201ENST00000557756 303 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 MIR3167-201ENST00000579623 85 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AL139395.1-201ENST00000603662 160 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 MIR432-201ENST00000606207 94 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RN7SL722P-201ENST00000617780 284 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 RN7SL565P-201ENST00000618246 284 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AC140479.6-201ENST00000633535 357 ntBASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM54Q9BYV2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 OR1S2-201ENST00000302592 978 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 Y_RNA.9-201ENST00000362354 101 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 RN7SKP44-201ENST00000363602 316 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 RNU6-282P-201ENST00000365357 103 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 RNA5SP332-201ENST00000391063 115 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 SNORD66.1-201ENST00000391230 76 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 MTCO3P12-201ENST00000416718 547 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC004552.1-201ENST00000419089 348 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC069157.1-201ENST00000421749 137 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 MTCO2P3-201ENST00000442543 421 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 Z99127.3-201ENST00000448158 395 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC007967.1-201ENST00000455422 1159 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 snoU13.1-201ENST00000459157 104 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 RPS26P3-201ENST00000470205 348 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC023598.1-201ENST00000472521 361 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC090543.2-201ENST00000483963 348 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC004057.1-201ENST00000485827 348 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 RPS3AP50-201ENST00000487064 803 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 RPL35P6-201ENST00000490024 372 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC079382.1-201ENST00000493346 557 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 VWA8P1-201ENST00000510889 176 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC021146.1-201ENST00000511202 716 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC010342.1-201ENST00000514047 877 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 SUB1P2-201ENST00000556401 297 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 AL603758.1-201ENST00000618654 241 ntBASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM54Q9BYV2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
TRIM54Q9BYV2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 OR5J1P-201ENST00000313544 939 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 RNU6-223P-201ENST00000362830 107 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 Y_RNA.372-201ENST00000365599 102 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 SNORD3H-201ENST00000384486 214 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 RNU6-456P-201ENST00000384493 107 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC097374.1-203ENST00000400783 485 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 RNU4-65P-201ENST00000410473 140 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 MTND1P23-201ENST00000416931 372 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC092017.2-201ENST00000427600 362 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AL139415.2-201ENST00000431968 163 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms