Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 RN7SKP113-201ENST00000363891 295 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 RNU6-328P-201ENST00000390887 106 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 GSTM3P2-201ENST00000412746 530 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 RAC1P7-201ENST00000445367 377 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AL031584.1-201ENST00000447169 754 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 RPS20P21-201ENST00000466859 343 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 TRBV1-201ENST00000476502 284 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 RN7SL826P-201ENST00000479724 288 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 COX6B1P2-201ENST00000489624 230 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC020893.1-201ENST00000502452 580 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC116655.1-201ENST00000508324 901 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 RNY3P15-201ENST00000516297 97 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC105031.1-201ENST00000518550 476 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 OR8R1P-201ENST00000543943 764 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC018889.1-201ENST00000605372 397 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 MIR6128-201ENST00000615528 109 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC055839.1-201ENST00000634467 498 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 ZNF519P1-201ENST00000449011 1626 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AC005592.1-201ENST00000566527 1640 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 AL158163.1-201ENST00000603915 1649 ntBASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SSBP3Q9BWW4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AL138713.1-201ENST00000624026 2130 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 RNU6-490P-201ENST00000362985 107 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 RNU6-1109P-201ENST00000391187 107 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 MIR450B-201ENST00000401182 78 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 RNU6-101P-201ENST00000410323 104 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 RN7SKP114-201ENST00000410327 279 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC008267.5-201ENST00000424928 265 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 PSMA6P3-201ENST00000428242 164 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 RPL12P3-201ENST00000440080 396 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 RPL21P89-201ENST00000444021 467 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 NOP56P2-201ENST00000447491 769 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 GSTA11P-201ENST00000452866 669 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 BX284632.1-201ENST00000478218 541 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 RN7SL814P-201ENST00000487715 300 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC093767.1-201ENST00000504523 156 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC016559.2-201ENST00000510759 359 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 RNU6-189P-201ENST00000516120 101 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 RNU6-1143P-201ENST00000516125 104 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 Y_RNA.708-201ENST00000516950 96 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 OR11H5P-201ENST00000554039 926 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms