Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC007283.2-201ENST00000424739 197 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC019097.1-201ENST00000424783 735 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 RPL23AP30-201ENST00000432419 501 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 TPT1P12-201ENST00000448968 492 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 DHFRP3-201ENST00000455595 559 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 RN7SL98P-201ENST00000462271 300 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 RPL5P30-201ENST00000465511 891 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 RPS23P7-201ENST00000466210 444 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC108751.2-201ENST00000469993 231 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 EIF4EP3-201ENST00000498782 656 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC093677.1-201ENST00000514414 678 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 Y_RNA.691-201ENST00000516611 103 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 RN7SKP256-201ENST00000517201 314 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 SUB1P1-201ENST00000524415 382 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 PTP4A1P6-201ENST00000531034 478 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC090502.2-201ENST00000549267 280 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 HMGB3P26-201ENST00000560051 582 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC093519.1-201ENST00000566109 298 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 MIR3167-201ENST00000579623 85 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 PSMA6P4-201ENST00000603247 718 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AL391813.2-201ENST00000609113 322 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC019193.3-201ENST00000609144 554 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC084781.2-201ENST00000615568 161 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC018926.3-201ENST00000618841 406 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 NXPH1-205ENST00000602349 1953 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 RNF6P1-201ENST00000444889 1784 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 RIOK3P1-201ENST00000418778 1528 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-984P-201ENST00000363236 109 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 U3.22-201ENST00000391120 215 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-373P-201ENST00000411247 98 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 COX6CP17-201ENST00000421389 185 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AL645937.1-202ENST00000421799 937 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AL732292.1-201ENST00000426692 226 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 C4BPAP2-201ENST00000428434 478 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 RPL7P4-203ENST00000430239 730 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 GTF2IP13-201ENST00000438487 386 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC114495.1-201ENST00000441274 436 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 PHBP16-201ENST00000446318 950 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AL445433.1-201ENST00000457507 257 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC011276.1-201ENST00000469688 323 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC034159.1-201ENST00000513885 583 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-1170P-201ENST00000515974 106 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 SNORA40.12-201ENST00000516329 111 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 Vault.3-201ENST00000516676 95 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-1314P-201ENST00000517139 104 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC006270.2-201ENST00000578523 652 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AL512605.2-201ENST00000592972 256 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC079587.1-201ENST00000603846 277 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC004853.1-201ENST00000604902 698 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC080078.3-201ENST00000605407 463 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AL080274.1-201ENST00000605565 220 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AC020634.1-201ENST00000608701 549 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 uc_338.13-201ENST00000618243 179 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AL356585.4-201ENST00000623078 1229 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 AL359757.2-201ENST00000624309 274 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms