Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS35Q96QK1 OR4G11P-202ENST00000642116 1414 ntBASIC3.15□□□□□ -1.91
VPS35Q96QK1 API5P2-201ENST00000397055 1498 ntBASIC3.15□□□□□ -1.91
VPS35Q96QK1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.15□□□□□ -1.91
VPS35Q96QK1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS35Q96QK1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS35Q96QK1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 ZNF807-201ENST00000328088 1707 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VPS35Q96QK1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 OR1S2-201ENST00000302592 978 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 RNU6-173P-201ENST00000364215 104 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 Y_RNA.408-201ENST00000383987 102 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 Y_RNA.472-201ENST00000384322 102 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 RNU2-47P-201ENST00000410649 186 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 RPS15AP38-201ENST00000413110 372 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 RPL21P32-201ENST00000419877 477 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 MUPP-201ENST00000438111 566 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 AL645638.1-201ENST00000440519 361 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 MTND2P20-201ENST00000440805 661 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 MTCO1P53-201ENST00000441633 699 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AL358794.1-201ENST00000445689 381 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 TRGVB-201ENST00000453257 471 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AC023424.2-201ENST00000493479 777 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 HMGB1P28-201ENST00000507778 552 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AC104027.1-201ENST00000521887 300 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 OR5AK1P-201ENST00000524837 922 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 MED28P6-201ENST00000558776 231 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 MIR5195-201ENST00000583555 115 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AC078899.3-201ENST00000599065 212 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AC069304.2-201ENST00000605154 435 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AC106028.5-201ENST00000610332 395 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AC243773.3-201ENST00000613270 256 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AC025588.4-201ENST00000615802 908 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AL121895.2-201ENST00000619558 447 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AC018692.3-201ENST00000623929 123 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 AC091903.1-201ENST00000624322 454 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 MIR622-201ENST00000638396 96 ntBASIC3.14□□□□□ -1.91
VPS35Q96QK1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS35Q96QK1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS35Q96QK1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VPS35Q96QK1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
VPS35Q96QK1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 SNORD116-12-201ENST00000384468 92 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 SAR1AP2-201ENST00000392696 594 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 AC068533.2-201ENST00000411872 306 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 AL590233.1-201ENST00000430017 456 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 AC004866.2-201ENST00000438285 481 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 MTCYBP34-201ENST00000439552 670 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 MTATP6P14-201ENST00000455189 673 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VPS35Q96QK1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 AC090453.1-201ENST00000495560 436 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 AC113420.1-201ENST00000507903 571 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 AP001207.2-201ENST00000519490 539 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 CR383656.7-201ENST00000548164 174 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 AL157394.1-201ENST00000562983 1224 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 BNIP3P22-201ENST00000593399 556 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 BNIP3P27-201ENST00000599991 412 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 AL022099.1-201ENST00000604551 712 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 AL158050.2-201ENST00000605336 568 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 AC080013.4-201ENST00000607624 649 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS35Q96QK1 AL442067.2-201ENST00000614033 363 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 MIR3651-201ENST00000630427 90 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 MTND4P9-201ENST00000507819 1346 ntBASIC3.13□□□□□ -1.91
VPS35Q96QK1 AC093010.3-201ENST00000570269 15214 ntBASIC3.12□□□□□ -1.91
VPS35Q96QK1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS35Q96QK1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
VPS35Q96QK1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS35Q96QK1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS35Q96QK1 RNU6-1122P-201ENST00000384449 107 ntBASIC3.12□□□□□ -1.91
VPS35Q96QK1 DHFRP6-201ENST00000401776 268 ntBASIC3.12□□□□□ -1.91
VPS35Q96QK1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.12□□□□□ -1.91
VPS35Q96QK1 U3.42-201ENST00000408746 214 ntBASIC3.12□□□□□ -1.91
VPS35Q96QK1 AC007742.1-201ENST00000425789 329 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms