Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNU5B-1-201ENST00000363286 116 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 RNU6-1066P-201ENST00000363573 105 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
COL21A1Q96P44 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
COL21A1Q96P44 SNORA48.5-201ENST00000391143 135 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 U3.29-201ENST00000391296 212 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AL133264.1-201ENST00000407157 562 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.73□□□□□ -1.97
COL21A1Q96P44 RN7SKP284-201ENST00000411002 343 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 RNU6-575P-201ENST00000411326 105 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 RPL7P8-201ENST00000411964 730 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AC104332.2-201ENST00000429959 156 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.73□□□□□ -1.97
COL21A1Q96P44 RPL39P40-201ENST00000445481 146 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AC017099.1-201ENST00000448261 1028 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AL162389.1-201ENST00000449233 177 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AC140076.1-201ENST00000449897 361 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AL590639.1-201ENST00000456484 337 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 RPS23P3-201ENST00000470993 430 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AC096751.1-202ENST00000502691 1067 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 MLLT10P2-201ENST00000506434 249 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AC069306.1-201ENST00000507006 843 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AC026412.2-201ENST00000512270 1075 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.73□□□□□ -1.97
COL21A1Q96P44 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.73□□□□□ -1.97
COL21A1Q96P44 AC022080.3-201ENST00000544433 482 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL21A1Q96P44 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.73□□□□□ -1.97
COL21A1Q96P44 MTCO3P24-201ENST00000572729 782 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AC005776.1-201ENST00000603164 290 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AL137843.1-201ENST00000605078 385 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 AC008083.4-201ENST00000615076 444 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 CYP3A51P-201ENST00000633513 256 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.73□□□□□ -1.97
COL21A1Q96P44 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.73□□□□□ -1.97
COL21A1Q96P44 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.73□□□□□ -1.97
COL21A1Q96P44 ASNSP3-201ENST00000451989 1306 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
COL21A1Q96P44 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
COL21A1Q96P44 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL21A1Q96P44 ZNF807-201ENST00000328088 1707 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 RPL9P7-201ENST00000330965 580 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
COL21A1Q96P44 SUGT1P1-201ENST00000379514 476 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 SNORD51-201ENST00000384320 80 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 MIR217-201ENST00000384817 110 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 MTATP6P19-201ENST00000413797 659 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 MTCO2P1-201ENST00000424648 477 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 AC233728.2-201ENST00000425348 757 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 RPL35AP12-201ENST00000425362 338 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 AC092393.1-201ENST00000439625 742 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 AL831737.1-201ENST00000441288 271 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 RSL24D1P3-201ENST00000449255 495 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 AL445669.2-201ENST00000454425 421 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 S100A11P2-201ENST00000467589 312 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 HMGB1P25-201ENST00000468402 607 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 RPS27AP9-201ENST00000477681 438 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 AC010625.1-201ENST00000511296 403 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 AC027309.2-201ENST00000520566 192 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 FAM60DP-201ENST00000524174 632 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 AP000857.1-201ENST00000532151 543 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 AC008127.2-201ENST00000549925 1075 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 AC015871.2-201ENST00000603605 948 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 ATP5A1P2-202ENST00000616464 443 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 AC040168.1-201ENST00000623594 991 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 AC006927.2-201ENST00000639256 389 ntBASIC2.72□□□□□ -1.97
COL21A1Q96P44 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL21A1Q96P44 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL21A1Q96P44 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.72□□□□□ -1.97
COL21A1Q96P44 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
COL21A1Q96P44 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
COL21A1Q96P44 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
COL21A1Q96P44 AL161431.1-201ENST00000618966 4205 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL21A1Q96P44 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL21A1Q96P44 OR5H2-201ENST00000355273 945 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 RNU1-35P-201ENST00000362782 153 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 RNU6-173P-201ENST00000364215 104 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 SNORA9.2-201ENST00000365361 133 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 RNU6-1074P-201ENST00000383995 104 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 RNU6-851P-201ENST00000384565 107 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 AC027644.1-201ENST00000419595 298 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 Z93242.1-201ENST00000427102 353 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 SAR1AP4-201ENST00000429225 591 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms