Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AL359715.5-201ENST00000623431 443 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX27Q96L92 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SNX27Q96L92 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX27Q96L92 AL049780.3-201ENST00000624612 1583 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX27Q96L92 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SNX27Q96L92 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX27Q96L92 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX27Q96L92 MAPK10-253ENST00000641010 4072 ntBASIC4.38□□□□□ -1.71
SNX27Q96L92 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX27Q96L92 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX27Q96L92 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX27Q96L92 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX27Q96L92 AC027287.1-201ENST00000553115 1453 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SNX27Q96L92 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX27Q96L92 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX27Q96L92 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX27Q96L92 RNU6-853P-201ENST00000364306 107 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SNX27Q96L92 RNU6-809P-201ENST00000384461 107 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 AL356421.1-201ENST00000403255 413 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 AMD1P2-201ENST00000412936 992 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX27Q96L92 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX27Q96L92 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX27Q96L92 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX27Q96L92 ELOCP18-201ENST00000434209 337 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 AC096638.2-201ENST00000434965 711 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX27Q96L92 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX27Q96L92 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX27Q96L92 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX27Q96L92 RPS11P1-201ENST00000451072 473 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 FABP3P2-201ENST00000453169 399 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 RPS20P22-201ENST00000473700 357 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 AC034222.1-201ENST00000494052 532 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX27Q96L92 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX27Q96L92 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX27Q96L92 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.37□□□□□ -1.71
SNX27Q96L92 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
SNX27Q96L92 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.37□□□□□ -1.71
SNX27Q96L92 CYP4A43P-201ENST00000568156 121 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 AC007599.1-201ENST00000568688 1174 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 MIR5697-201ENST00000578045 78 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX27Q96L92 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX27Q96L92 AL139286.2-201ENST00000606838 396 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 AC091965.4-201ENST00000607691 587 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 TUG1_1.1-201ENST00000610654 145 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 uc_338.32-201ENST00000615087 172 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.37□□□□□ -1.71
SNX27Q96L92 AC098679.4-201ENST00000624241 654 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX27Q96L92 AL512643.1-201ENST00000635735 524 ntBASIC4.37□□□□□ -1.71
SNX27Q96L92 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX27Q96L92 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SNX27Q96L92 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX27Q96L92 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX27Q96L92 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX27Q96L92 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.36□□□□□ -1.71
SNX27Q96L92 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SNX27Q96L92 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.36□□□□□ -1.71
SNX27Q96L92 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.36□□□□□ -1.71
SNX27Q96L92 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 Y_RNA.234-201ENST00000364409 97 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 RNU4-75P-201ENST00000364621 146 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 OR5H15-201ENST00000383696 930 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 MIR124-3-201ENST00000384866 87 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 MIR513A2-201ENST00000385249 127 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 RNU6-821P-201ENST00000390995 107 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 AL138880.1-201ENST00000405824 642 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 Z97055.1-201ENST00000419730 712 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 AL513174.1-201ENST00000423182 629 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.36□□□□□ -1.71
SNX27Q96L92 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX27Q96L92 HLA-N-201ENST00000437516 135 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX27Q96L92 AL592447.1-201ENST00000447592 540 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 AL445669.2-201ENST00000454425 421 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 CFTRP1-201ENST00000456646 183 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 MTCO1P42-201ENST00000457379 726 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 AC006517.1-201ENST00000480485 328 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX27Q96L92 AC006390.1-201ENST00000508068 283 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 AC079140.3-201ENST00000511111 550 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 FABP5P5-201ENST00000515537 406 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 RNU4-60P-201ENST00000517239 135 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 AP002748.2-201ENST00000528671 348 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.36□□□□□ -1.71
SNX27Q96L92 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX27Q96L92 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.36□□□□□ -1.71
SNX27Q96L92 TPMTP1-201ENST00000592307 737 ntBASIC4.36□□□□□ -1.71
SNX27Q96L92 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX27Q96L92 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.36□□□□□ -1.71
SNX27Q96L92 AC092354.2-201ENST00000607786 514 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms