Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.86□□□□□ -1.63
ERCC4Q92889 OR4F13P-201ENST00000428478 931 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.86□□□□□ -1.63
ERCC4Q92889 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.86□□□□□ -1.63
ERCC4Q92889 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.86□□□□□ -1.63
ERCC4Q92889 AC114495.1-201ENST00000441274 436 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 USP9YP15-201ENST00000442391 422 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.86□□□□□ -1.63
ERCC4Q92889 MTND1P11-201ENST00000456661 876 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 AC106872.2-201ENST00000494303 480 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 AC010587.1-201ENST00000505809 469 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 RNU6-1281P-201ENST00000516223 105 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.86□□□□□ -1.63
ERCC4Q92889 RAB11AP2-201ENST00000545905 639 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.86□□□□□ -1.63
ERCC4Q92889 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.86□□□□□ -1.63
ERCC4Q92889 SUB1P2-201ENST00000556401 297 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.86□□□□□ -1.63
ERCC4Q92889 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.86□□□□□ -1.63
ERCC4Q92889 UBE2V2P2-201ENST00000587677 504 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.86□□□□□ -1.63
ERCC4Q92889 AC234771.5-201ENST00000600161 514 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.86□□□□□ -1.63
ERCC4Q92889 AC007621.1-201ENST00000604544 437 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 MIR6748-201ENST00000610433 71 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 uc_338.32-201ENST00000615087 172 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 RN7SL722P-201ENST00000617780 284 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 RN7SL565P-201ENST00000618246 284 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 AL356585.4-201ENST00000623078 1229 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ERCC4Q92889 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.86□□□□□ -1.63
ERCC4Q92889 AC105074.1-201ENST00000623380 3095 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 MTND4P12-201ENST00000498999 1377 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ERCC4Q92889 RAD17P1-201ENST00000418130 2042 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ERCC4Q92889 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.85□□□□□ -1.63
ERCC4Q92889 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
ERCC4Q92889 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ERCC4Q92889 MIR331-201ENST00000362302 94 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 RNU6-1207P-201ENST00000384343 107 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ERCC4Q92889 SDHCP2-201ENST00000398565 501 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 OR51A5P-201ENST00000415429 942 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AC119751.6-201ENST00000416712 186 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 MTATP6P18-201ENST00000417994 673 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.85□□□□□ -1.63
ERCC4Q92889 UQCRBP1-201ENST00000421129 336 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AC019097.1-201ENST00000424783 735 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AL035410.1-201ENST00000427409 427 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AC108734.1-201ENST00000439549 399 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 FDX1P2-201ENST00000450769 375 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AC092001.1-201ENST00000453012 261 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.85□□□□□ -1.63
ERCC4Q92889 RPS29P33-201ENST00000456717 146 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 MTCO2P29-201ENST00000465212 189 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 RPS20P21-201ENST00000466859 343 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 RPL23AP41-201ENST00000484754 458 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AC025554.1-201ENST00000505641 188 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.85□□□□□ -1.63
ERCC4Q92889 MTCO1P35-201ENST00000515270 228 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.85□□□□□ -1.63
ERCC4Q92889 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.85□□□□□ -1.63
ERCC4Q92889 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ERCC4Q92889 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.85□□□□□ -1.63
ERCC4Q92889 CBX3P5-201ENST00000552017 521 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AL161713.1-201ENST00000555538 145 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.85□□□□□ -1.63
ERCC4Q92889 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.85□□□□□ -1.63
ERCC4Q92889 AC067852.4-201ENST00000590314 478 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ERCC4Q92889 AL162413.1-201ENST00000603198 110 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AC008782.1-201ENST00000603386 430 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 AC064801.1-201ENST00000612025 407 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 Y_RNA.804-201ENST00000615262 101 ntBASIC4.85□□□□□ -1.63
ERCC4Q92889 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.85□□□□□ -1.63
ERCC4Q92889 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.85□□□□□ -1.63
ERCC4Q92889 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ERCC4Q92889 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.85□□□□□ -1.63
ERCC4Q92889 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ERCC4Q92889 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ERCC4Q92889 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.84□□□□□ -1.63
ERCC4Q92889 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ERCC4Q92889 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AC009951.1-201ENST00000623674 2614 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AL139811.1-201ENST00000424779 2299 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ERCC4Q92889 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC4Q92889 Y_RNA.279-201ENST00000364763 95 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 RNU6-169P-201ENST00000365336 107 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 RNU6-398P-201ENST00000384143 109 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 RNU6-761P-201ENST00000384148 107 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC4Q92889 AC092832.1-201ENST00000422934 400 ntBASIC4.84□□□□□ -1.63
ERCC4Q92889 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms