Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTF1Q92541 RPS26P3-201ENST00000470205 348 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 AC090543.2-201ENST00000483963 348 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 AC004057.1-201ENST00000485827 348 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 KCTD9P5-201ENST00000504141 1170 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.04□□□□□ -1.6
RTF1Q92541 RNA5SP164-201ENST00000516533 110 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.04□□□□□ -1.6
RTF1Q92541 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.04□□□□□ -1.6
RTF1Q92541 AL353997.4-201ENST00000586196 166 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTF1Q92541 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.04□□□□□ -1.6
RTF1Q92541 AL139395.1-201ENST00000603662 160 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.04□□□□□ -1.6
RTF1Q92541 AC067931.1-201ENST00000624190 671 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 AC019226.1-201ENST00000625666 515 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 AL157786.1-207ENST00000627771 695 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.04□□□□□ -1.6
RTF1Q92541 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTF1Q92541 ELL2P4-201ENST00000446870 1376 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.03□□□□□ -1.6
RTF1Q92541 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RTF1Q92541 LINC02471-203ENST00000641941 4752 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTF1Q92541 RNU6-867P-201ENST00000364956 107 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 U8.11-201ENST00000384699 133 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 U8.12-201ENST00000384701 133 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 SSXP10-201ENST00000402595 565 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 LAP3P1-201ENST00000403648 294 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 GSTA9P-201ENST00000406231 611 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 OR4F13P-201ENST00000428478 931 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 TIMM9P3-201ENST00000428659 274 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.03□□□□□ -1.6
RTF1Q92541 NEK4P1-201ENST00000433383 879 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 KCTD9P3-201ENST00000434597 1169 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 HSPE1P28-201ENST00000443139 211 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 MTATP6P30-201ENST00000443540 664 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.03□□□□□ -1.6
RTF1Q92541 U8.18-201ENST00000459285 133 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 RPL31P58-201ENST00000469001 379 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 RPL31P61-201ENST00000496160 376 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 AC025445.1-201ENST00000502728 300 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.03□□□□□ -1.6
RTF1Q92541 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.03□□□□□ -1.6
RTF1Q92541 AL391840.1-201ENST00000571144 367 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.03□□□□□ -1.6
RTF1Q92541 AC012603.1-201ENST00000606424 528 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.03□□□□□ -1.6
RTF1Q92541 AC128687.2-201ENST00000609657 566 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.03□□□□□ -1.6
RTF1Q92541 AC007014.2-201ENST00000615581 479 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 AC112200.1-201ENST00000625015 234 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 AC012442.3-202ENST00000636742 206 ntBASIC5.03□□□□□ -1.6
RTF1Q92541 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTF1Q92541 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTF1Q92541 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.03□□□□□ -1.6
RTF1Q92541 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.02□□□□□ -1.61
RTF1Q92541 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTF1Q92541 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTF1Q92541 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTF1Q92541 AC097714.1-201ENST00000511272 1647 ntBASIC5.02□□□□□ -1.61
RTF1Q92541 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RTF1Q92541 RNU6-343P-201ENST00000364709 104 ntBASIC5.02□□□□□ -1.61
RTF1Q92541 MIR670-201ENST00000390142 98 ntBASIC5.02□□□□□ -1.61
RTF1Q92541 RNU2-21P-201ENST00000410368 188 ntBASIC5.02□□□□□ -1.61
RTF1Q92541 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.02□□□□□ -1.61
RTF1Q92541 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTF1Q92541 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.02□□□□□ -1.61
RTF1Q92541 AC146507.1-201ENST00000468335 354 ntBASIC5.02□□□□□ -1.61
RTF1Q92541 AL121769.1-201ENST00000469473 401 ntBASIC5.02□□□□□ -1.61
RTF1Q92541 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.02□□□□□ -1.61
RTF1Q92541 AC034222.1-201ENST00000494052 532 ntBASIC5.02□□□□□ -1.61
RTF1Q92541 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.02□□□□□ -1.61
RTF1Q92541 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.02□□□□□ -1.61
RTF1Q92541 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.02□□□□□ -1.61
RTF1Q92541 PRDX4P1-201ENST00000507189 574 ntBASIC5.02□□□□□ -1.61
RTF1Q92541 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RTF1Q92541 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.02□□□□□ -1.61
RTF1Q92541 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.02□□□□□ -1.61
RTF1Q92541 AP003122.4-201ENST00000530980 758 ntBASIC5.02□□□□□ -1.61
RTF1Q92541 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.02□□□□□ -1.61
RTF1Q92541 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.02□□□□□ -1.61
RTF1Q92541 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.02□□□□□ -1.61
RTF1Q92541 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RTF1Q92541 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RTF1Q92541 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
RTF1Q92541 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTF1Q92541 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTF1Q92541 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
RTF1Q92541 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.02□□□□□ -1.61
RTF1Q92541 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RTF1Q92541 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
RTF1Q92541 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTF1Q92541 AC095050.2-201ENST00000510748 1458 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTF1Q92541 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.01□□□□□ -1.61
RTF1Q92541 AL161912.2-201ENST00000565707 3007 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 AL049780.3-201ENST00000624612 1583 ntBASIC5.01□□□□□ -1.61
RTF1Q92541 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RTF1Q92541 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms