Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AP003034.1-201ENST00000534621 422 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AL512310.1-201ENST00000548639 172 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC067852.4-201ENST00000590314 478 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC068790.5-201ENST00000602741 355 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AL391813.2-201ENST00000609113 322 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC017083.3-201ENST00000609955 700 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC009704.2-201ENST00000618739 483 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 MIR4727-201ENST00000622232 55 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AP006248.2-201ENST00000623309 592 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AP000843.1-201ENST00000624880 701 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 MIR4496-201ENST00000635896 61 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AL133243.3-201ENST00000617415 3004 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 AC009902.3-201ENST00000606235 2172 ntBASIC4.19□□□□□ -1.74
ATG4AQ8WYN0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 RNU6-1085P-201ENST00000363576 107 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 RNU6-1090P-201ENST00000364065 94 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 Y_RNA.409-201ENST00000383990 98 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 Y_RNA.573-201ENST00000384763 105 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 FGF7P8-201ENST00000402994 292 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 RN7SKP285-201ENST00000410137 318 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 CHIAP3-201ENST00000423668 1133 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 UBE2V1P13-201ENST00000436983 439 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 MTND6P18-201ENST00000439477 513 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 USP9YP15-201ENST00000442391 422 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 H2AFZP6-201ENST00000444403 394 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AL353691.1-201ENST00000451332 387 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC069499.1-201ENST00000489433 509 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC055855.1-201ENST00000489563 579 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 COX7A2P2-201ENST00000505291 250 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 Y_RNA.693-201ENST00000516641 110 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC022968.1-201ENST00000567372 442 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 MIR4330-201ENST00000579077 105 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC060771.1-201ENST00000582031 164 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC234771.5-201ENST00000600161 514 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 BNIP3P30-201ENST00000601184 574 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC068790.4-201ENST00000602474 263 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 MIR6798-201ENST00000612887 67 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC011944.2-201ENST00000624440 683 ntBASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4AQ8WYN0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 AC138915.3-201ENST00000562908 1389 ntBASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 PABPC1P7-201ENST00000413177 1513 ntBASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 RAP1BP3-201ENST00000407180 549 ntBASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 RPL26P29-201ENST00000415623 438 ntBASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 HMGB3P20-201ENST00000417997 600 ntBASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 AC092832.1-201ENST00000422934 400 ntBASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 PSMA2P3-201ENST00000429685 675 ntBASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 AC119618.1-201ENST00000434191 222 ntBASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 Z95327.1-201ENST00000446082 482 ntBASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.17□□□□□ -1.74
ATG4AQ8WYN0 MTCO2P29-201ENST00000465212 189 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms