Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC109347.2-201ENST00000610220 349 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AL589743.7-201ENST00000612637 233 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC012314.7-201ENST00000619693 93 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AL139089.1-201ENST00000620372 975 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AL133412.1-201ENST00000380194 2992 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC068254.2-201ENST00000623938 3577 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AP004289.2-201ENST00000444413 1457 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC067945.1-201ENST00000342609 618 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 RPS23P10-201ENST00000416185 486 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 SPA17P1-201ENST00000416656 452 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AL137014.1-201ENST00000420490 1226 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 BEND7P1-201ENST00000422058 457 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 UBDP1-202ENST00000457888 382 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AP004371.1-201ENST00000525240 214 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AP003181.2-201ENST00000528941 181 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AP000907.2-201ENST00000530827 353 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC022882.1-201ENST00000532142 501 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AL356432.3-201ENST00000568952 465 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC137800.2-201ENST00000574375 120 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 OR4K8P-201ENST00000578842 1048 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 CKS1BP3-201ENST00000600888 237 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 MIR432-201ENST00000606207 94 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 TUG1_1.1-201ENST00000610654 145 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC005344.1-201ENST00000613391 459 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC015540.1-201ENST00000615828 501 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 MIR7702-201ENST00000621931 59 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC067931.1-201ENST00000624190 671 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AL034408.1-202ENST00000636088 415 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC010149.2-201ENST00000637608 315 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 AC010733.2-201ENST00000589496 5702 ntBASIC4.01□□□□□ -1.77
HMGB4Q8WW32 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGB4Q8WW32 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4□□□□□ -1.77
HMGB4Q8WW32 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HMGB4Q8WW32 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4□□□□□ -1.77
HMGB4Q8WW32 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4□□□□□ -1.77
HMGB4Q8WW32 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HMGB4Q8WW32 RNU1-15P-201ENST00000353977 144 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4□□□□□ -1.77
HMGB4Q8WW32 RNU6-1078P-201ENST00000364522 103 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 Y_RNA.505-201ENST00000384489 102 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 Y_RNA.517-201ENST00000384551 106 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 MIR135A2-201ENST00000384854 100 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4□□□□□ -1.77
HMGB4Q8WW32 RNU2-66P-201ENST00000410650 161 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 HMGB3P23-201ENST00000414981 585 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 OR1AA1P-201ENST00000419597 916 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC092832.1-201ENST00000422934 400 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4□□□□□ -1.77
HMGB4Q8WW32 AC233728.2-201ENST00000425348 757 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 NANOGP6-201ENST00000429190 847 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4□□□□□ -1.77
HMGB4Q8WW32 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4□□□□□ -1.77
HMGB4Q8WW32 RAC1P7-201ENST00000445367 377 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4□□□□□ -1.77
HMGB4Q8WW32 KLF3P2-201ENST00000465138 268 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 S100A11P1-201ENST00000477525 312 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4□□□□□ -1.77
HMGB4Q8WW32 RPL7P23-201ENST00000493874 747 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC113430.1-201ENST00000506872 718 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4□□□□□ -1.77
HMGB4Q8WW32 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
HMGB4Q8WW32 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4□□□□□ -1.77
HMGB4Q8WW32 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms