Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 MIR3915-201ENST00000578518 97 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNED1Q8TER0 ELOCP29-201ENST00000588193 334 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 VN1R88P-201ENST00000596787 292 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 AC078795.2-201ENST00000602835 1252 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AL031281.1-201ENST00000604049 488 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 U1.23-201ENST00000610293 146 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 RNU1-68P-201ENST00000615382 146 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AC018755.4-201ENST00000619715 454 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 U1.39-201ENST00000621562 146 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AC092656.1-203ENST00000624134 423 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AL359757.2-201ENST00000624309 274 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 SGO1P2-201ENST00000429458 1589 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SNED1Q8TER0 ZNF33CP-201ENST00000432492 2030 ntBASIC3.74□□□□□ -1.81
SNED1Q8TER0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNED1Q8TER0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
SNED1Q8TER0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SNED1Q8TER0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SNED1Q8TER0 MIR22-201ENST00000362190 85 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 RNU6-553P-201ENST00000364047 96 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 RNU6-517P-201ENST00000384362 110 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNED1Q8TER0 ELOCP17-201ENST00000414751 326 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 RPS12P23-201ENST00000419579 400 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 AC246680.2-201ENST00000422106 389 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 RAC1P8-201ENST00000427086 527 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 BX679664.1-201ENST00000434429 253 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 CST9LP2-201ENST00000437612 320 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.73□□□□□ -1.81
SNED1Q8TER0 AC007327.1-201ENST00000447461 264 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.73□□□□□ -1.81
SNED1Q8TER0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.73□□□□□ -1.81
SNED1Q8TER0 AL035404.1-201ENST00000497982 568 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.73□□□□□ -1.81
SNED1Q8TER0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.73□□□□□ -1.81
SNED1Q8TER0 AC010198.2-201ENST00000550612 259 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.73□□□□□ -1.81
SNED1Q8TER0 AGGF1P8-201ENST00000562979 1000 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.73□□□□□ -1.81
SNED1Q8TER0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.73□□□□□ -1.81
SNED1Q8TER0 AC002400.1-201ENST00000569310 726 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 AP003465.2-201ENST00000602571 373 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 AC092794.1-201ENST00000612734 582 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 AC073968.1-201ENST00000618594 637 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
SNED1Q8TER0 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 AF246928.1-201ENST00000623768 87 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 AL603839.4-201ENST00000624658 1005 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 ZNF663P-202ENST00000641770 1131 ntBASIC3.73□□□□□ -1.81
SNED1Q8TER0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNED1Q8TER0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.72□□□□□ -1.81
SNED1Q8TER0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
SNED1Q8TER0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNED1Q8TER0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SNED1Q8TER0 OR1S2-201ENST00000302592 978 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 RSL24D1P4-201ENST00000400938 484 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AL590084.2-201ENST00000401481 382 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.72□□□□□ -1.81
SNED1Q8TER0 Z75741.2-201ENST00000417272 1167 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 RPL31P45-201ENST00000419532 356 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AC023128.2-201ENST00000420880 1223 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AL645937.1-202ENST00000421799 937 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.72□□□□□ -1.81
SNED1Q8TER0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.72□□□□□ -1.81
SNED1Q8TER0 AL354941.1-201ENST00000438600 464 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AC108734.1-201ENST00000439549 399 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 HMGB1P48-201ENST00000446155 598 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AP000936.2-201ENST00000447151 681 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AL109741.2-201ENST00000455561 343 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AC010424.1-201ENST00000506336 297 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.72□□□□□ -1.81
SNED1Q8TER0 MIR4425-201ENST00000580572 84 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNED1Q8TER0 VN1R83P-201ENST00000595685 445 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AC073648.5-201ENST00000603502 305 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AL392112.1-201ENST00000605115 829 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AC072039.2-201ENST00000608883 439 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AL158063.1-201ENST00000615349 536 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AC015540.1-201ENST00000615828 501 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 AL160394.1-201ENST00000624765 724 ntBASIC3.72□□□□□ -1.81
SNED1Q8TER0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SNED1Q8TER0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SNED1Q8TER0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.72□□□□□ -1.81
SNED1Q8TER0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
SNED1Q8TER0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.71□□□□□ -1.82
SNED1Q8TER0 RNU6-157P-201ENST00000383957 107 ntBASIC3.71□□□□□ -1.82
SNED1Q8TER0 Y_RNA.560-201ENST00000384689 102 ntBASIC3.71□□□□□ -1.82
SNED1Q8TER0 SNORD15B-201ENST00000384714 146 ntBASIC3.71□□□□□ -1.82
SNED1Q8TER0 SNORD65C-201ENST00000390962 71 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms