Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 ZNF33CP-201ENST00000432492 2030 ntBASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCHCR1Q8TD31 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 RNU6-1085P-201ENST00000363576 107 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 Y_RNA.159-201ENST00000363674 87 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 RNU6-1090P-201ENST00000364065 94 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 ELOCP14-201ENST00000428070 331 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 DNAJC19P7-201ENST00000428811 344 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 RPL23AP1-201ENST00000428990 471 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 AC068287.1-201ENST00000430283 295 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 ELOCP7-201ENST00000439968 331 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 HMGB3P22-202ENST00000451823 572 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 RN7SL585P-201ENST00000470538 280 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 MIR2114-201ENST00000516645 80 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 RNU6-528P-201ENST00000516926 100 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 AC025678.1-201ENST00000567861 338 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 AC068790.3-201ENST00000602988 553 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 AP001330.5-201ENST00000607176 411 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 CR848007.1-201ENST00000442354 1699 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 RAD17P1-201ENST00000418130 2042 ntBASIC4.5□□□□□ -1.69
CCHCR1Q8TD31 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AL139811.1-201ENST00000424779 2299 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 FAM35DP-201ENST00000323387 2712 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 RNA5SP388-201ENST00000362584 119 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 RNU6-534P-201ENST00000364877 106 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 RN7SKP177-201ENST00000410567 355 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 RNA5SP306-201ENST00000411087 107 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AL161631.1-201ENST00000417933 486 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 RPL7AP25-201ENST00000423357 805 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AC011998.1-201ENST00000433403 117 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 RPL23AP20-201ENST00000447965 421 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 snoU109.4-201ENST00000458953 143 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AC069439.1-201ENST00000494739 167 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AC007424.1-203ENST00000554613 687 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AL121579.1-201ENST00000555129 305 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AL512360.1-201ENST00000555346 234 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AC012507.3-201ENST00000603556 477 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AC002550.2-201ENST00000621246 394 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 MIR7702-201ENST00000621931 59 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AL356585.4-201ENST00000623078 1229 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 AC139792.3-201ENST00000623525 224 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 MFSD8-216ENST00000641147 4009 ntBASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCHCR1Q8TD31 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms