Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC055839.1-201ENST00000634467 498 ntBASIC4.71□□□□□ -1.66
NUP43Q8NFH3 AC073869.10-201ENST00000642016 354 ntBASIC4.71□□□□□ -1.66
NUP43Q8NFH3 TPTE2P4-201ENST00000258589 1605 ntBASIC4.71□□□□□ -1.66
NUP43Q8NFH3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.71□□□□□ -1.66
NUP43Q8NFH3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP43Q8NFH3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 Y_RNA.135-201ENST00000363439 95 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 RNU6-960P-201ENST00000364056 120 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 RNU6-1078P-201ENST00000364522 103 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 RNU6-550P-201ENST00000391057 101 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC013442.1-201ENST00000397347 228 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 RN7SKP216-201ENST00000411050 312 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 DPPA2P3-201ENST00000411853 655 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 MCFD2P1-201ENST00000417812 300 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 NUP35P1-201ENST00000422734 947 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AL450023.3-201ENST00000440592 271 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AL731563.1-201ENST00000442202 214 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 KNOP1P3-201ENST00000446933 426 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AL691482.1-201ENST00000453255 87 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 DHFRP3-201ENST00000455595 559 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 RPS18P6-201ENST00000476880 458 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 SNRPCP2-201ENST00000504370 475 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 HIGD1AP14-201ENST00000507617 282 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC079140.5-201ENST00000507882 310 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 NDUFB5P1-201ENST00000508134 564 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 RNU6-1213P-201ENST00000517075 94 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 CDH12P4-201ENST00000517835 295 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 CDH12P3-201ENST00000517935 295 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 CDH12P1-201ENST00000518435 295 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC135001.1-201ENST00000544546 283 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AL355598.1-201ENST00000604169 202 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AL451044.1-201ENST00000604867 238 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC010680.4-201ENST00000605334 543 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC005014.2-201ENST00000607795 599 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC083806.3-201ENST00000614016 455 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC022418.1-201ENST00000624118 445 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC119674.1-207ENST00000641355 633 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AC109780.1-201ENST00000451768 1344 ntBASIC4.7□□□□□ -1.66
NUP43Q8NFH3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP43Q8NFH3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NUP43Q8NFH3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP43Q8NFH3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NUP43Q8NFH3 RNU6-1040P-201ENST00000383974 107 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 RNU6-1032P-201ENST00000384100 107 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 RNU6-171P-201ENST00000384354 107 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 SNORA70.10-201ENST00000384515 134 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 SNORA66-201ENST00000384792 133 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 U3.36-201ENST00000408418 213 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
NUP43Q8NFH3 Y_RNA.646-201ENST00000410980 101 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 GJA6P-201ENST00000415117 1042 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 ATG3P1-201ENST00000419507 911 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 DDX39BP1-205ENST00000422507 192 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 AC093106.2-201ENST00000428212 385 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.69□□□□□ -1.66
NUP43Q8NFH3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.69□□□□□ -1.66
NUP43Q8NFH3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.69□□□□□ -1.66
NUP43Q8NFH3 AL160004.2-201ENST00000432935 350 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 AL591623.2-201ENST00000449978 222 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 AC239809.1-201ENST00000450470 217 ntBASIC4.69□□□□□ -1.66
NUP43Q8NFH3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms