Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC44A3Q8N4M1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 AC005332.5-201ENST00000591222 2919 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 NUP58P1-201ENST00000502546 1738 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 OR52B1P-201ENST00000316506 909 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 SNORA63.1-201ENST00000362493 131 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 ARF4P3-201ENST00000397387 509 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 RNA5SP146-201ENST00000410743 123 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 PRELID3BP11-201ENST00000414230 479 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 AC243772.1-201ENST00000451620 410 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 PRSS3P4-201ENST00000453323 162 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 RAD23BP3-201ENST00000454157 1152 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 RPS20P24-201ENST00000457473 361 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 RNA5SP246-201ENST00000458909 119 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 RPL36AP51-201ENST00000487216 318 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 DEFB109F-201ENST00000491870 277 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 AC021146.3-201ENST00000511911 260 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 TRMT10BP1-201ENST00000519377 943 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 PDCD5P1-201ENST00000543528 309 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 RPS3AP23-202ENST00000574601 686 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 HMGB2P1-201ENST00000591146 634 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 AC078795.3-201ENST00000602913 472 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 NRBF2P5-201ENST00000603087 788 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 BNIP3P10-201ENST00000605360 577 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 AC009237.17-201ENST00000618111 748 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 AC016588.2-201ENST00000632484 3021 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 KPNA2P2-201ENST00000419546 1489 ntBASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A3Q8N4M1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 RNU4-1-201ENST00000363925 141 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 Y_RNA.481-201ENST00000384373 102 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 RPL23AP32-201ENST00000395315 459 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 RAB9AP3-201ENST00000412737 573 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC007390.1-201ENST00000415722 356 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC073136.2-201ENST00000417282 849 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AL513185.2-201ENST00000425543 193 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AL353777.1-201ENST00000425552 326 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 OR51AB1P-201ENST00000429046 620 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 GTF2IP20-201ENST00000431663 360 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 RPL22P17-201ENST00000438729 315 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC093019.1-201ENST00000443135 252 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC007677.1-201ENST00000445757 515 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC002381.1-201ENST00000447049 280 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 RAB9AP1-201ENST00000449393 573 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC139783.2-201ENST00000504847 1145 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 FGF7P4-201ENST00000509595 295 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC006499.6-201ENST00000511169 607 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 RNU6-347P-201ENST00000516658 105 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 ARL2BPP2-201ENST00000550907 489 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AL352979.3-201ENST00000553515 247 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 RPL21P7-201ENST00000557463 483 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC005498.1-201ENST00000592125 465 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AL160290.3-201ENST00000604869 165 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 SNORA51-201ENST00000606420 132 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC009159.1-201ENST00000618386 642 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 MIR6500-201ENST00000622700 86 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC024614.3-201ENST00000637860 256 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 AC008013.2-202ENST00000637965 364 ntBASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC44A3Q8N4M1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms